BLASTX nr result

ID: Coptis23_contig00024696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024696
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285182.1| PREDICTED: uncharacterized protein LOC100245...    69   5e-10
ref|XP_002517854.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_003543322.1| PREDICTED: uncharacterized protein LOC100820...    65   4e-09
ref|XP_002317478.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_003540380.1| PREDICTED: uncharacterized protein LOC100791...    64   1e-08

>ref|XP_002285182.1| PREDICTED: uncharacterized protein LOC100245332 [Vitis vinifera]
           gi|302142957|emb|CBI20252.3| unnamed protein product
           [Vitis vinifera]
          Length = 73

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/48 (68%), Positives = 37/48 (77%)
 Frame = +3

Query: 174 GGCRPLGFLIGLPFALLALIISVLGAIIWILGTVISXXXXXXXXXAGL 317
           G CRPLGFLIGLPFA LALI+SV+GAI+WILGTV+S         AGL
Sbjct: 2   GDCRPLGFLIGLPFAFLALILSVVGAIVWILGTVLSCLCPCCICCAGL 49


>ref|XP_002517854.1| conserved hypothetical protein [Ricinus communis]
           gi|223542836|gb|EEF44372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 73

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +3

Query: 174 GGCRPLGFLIGLPFALLALIISVLGAIIWILGTVISXXXXXXXXXAGL 317
           G CRPLGFL+GLPFAL+AL++S++GA+IW++GTV+S         AGL
Sbjct: 2   GDCRPLGFLLGLPFALIALVLSLVGAVIWVIGTVLSCLCPCCVCCAGL 49


>ref|XP_003543322.1| PREDICTED: uncharacterized protein LOC100820571 [Glycine max]
           gi|255633828|gb|ACU17275.1| unknown [Glycine max]
          Length = 78

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
 Frame = +3

Query: 162 MTEEGGC--RPLGFLIGLPFALLALIISVLGAIIWILGTVISXXXXXXXXXAGL 317
           M EE GC  RPLGFL+GLPFALLALI+S++GA+IW+LG+++S         AGL
Sbjct: 1   MGEEEGCECRPLGFLLGLPFALLALILSLVGAVIWVLGSILSCLCPCCICCAGL 54


>ref|XP_002317478.1| predicted protein [Populus trichocarpa] gi|222860543|gb|EEE98090.1|
           predicted protein [Populus trichocarpa]
          Length = 73

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = +3

Query: 174 GGCRPLGFLIGLPFALLALIISVLGAIIWILGTVISXXXXXXXXXAGL 317
           G C+PLGFLIGLPFAL+AL++S++GA+IW++GTV+S         AGL
Sbjct: 2   GDCKPLGFLIGLPFALVALVLSLIGAVIWVIGTVLSCLCPCCICFAGL 49


>ref|XP_003540380.1| PREDICTED: uncharacterized protein LOC100791118 [Glycine max]
          Length = 78

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/54 (59%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
 Frame = +3

Query: 162 MTEEGGC--RPLGFLIGLPFALLALIISVLGAIIWILGTVISXXXXXXXXXAGL 317
           M EE GC  RPLGFL+GLPFALLALI+S++GA+IW LG+++S         AGL
Sbjct: 1   MGEEEGCECRPLGFLLGLPFALLALILSLVGAVIWALGSILSCLCPCCICCAGL 54


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