BLASTX nr result

ID: Coptis23_contig00024680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024680
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   109   2e-22
ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...   107   1e-21
ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis...   107   1e-21
ref|XP_002527764.1| eukaryotic translation initiation factor 2c,...   107   1e-21
gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]                105   5e-21

>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -1

Query: 244 ESDVPSIAAVVCSRQWPLISCYRASMRTQSPKVEIIDSRVKQVSDNIDEGIVRELLLDFS 65
           +SDVPSIAAVV SRQWPLIS YRAS+RTQSPKVE+IDS  K+VS+  DEGI+RELLLDF 
Sbjct: 656 QSDVPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDSLYKRVSETEDEGIIRELLLDFY 715

Query: 64  ANSGGRMPEQIVIF 23
            +SG R P+QI+IF
Sbjct: 716 VSSGKRKPDQIIIF 729


>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
           sativus]
          Length = 915

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/74 (70%), Positives = 64/74 (86%)
 Frame = -1

Query: 244 ESDVPSIAAVVCSRQWPLISCYRASMRTQSPKVEIIDSRVKQVSDNIDEGIVRELLLDFS 65
           +SD+PSIAAVV SRQWPLIS YRA++RTQSPKVE+IDS  K++SD  D+GI+RELLLDF 
Sbjct: 658 QSDIPSIAAVVSSRQWPLISRYRAAVRTQSPKVEMIDSLYKRISDTEDDGIMRELLLDFY 717

Query: 64  ANSGGRMPEQIVIF 23
            +SG R P+QI+IF
Sbjct: 718 TSSGKRKPDQIIIF 731


>ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis sativus]
          Length = 915

 Score =  107 bits (267), Expect = 1e-21
 Identities = 52/74 (70%), Positives = 64/74 (86%)
 Frame = -1

Query: 244 ESDVPSIAAVVCSRQWPLISCYRASMRTQSPKVEIIDSRVKQVSDNIDEGIVRELLLDFS 65
           +SD+PSIAAVV SRQWPLIS YRA++RTQSPKVE+IDS  K++SD  D+GI+RELLLDF 
Sbjct: 658 QSDIPSIAAVVSSRQWPLISRYRAAVRTQSPKVEMIDSLYKRISDTEDDGIMRELLLDFY 717

Query: 64  ANSGGRMPEQIVIF 23
            +SG R P+QI+IF
Sbjct: 718 TSSGKRKPDQIIIF 731


>ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223532851|gb|EEF34625.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 921

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/73 (75%), Positives = 62/73 (84%)
 Frame = -1

Query: 241 SDVPSIAAVVCSRQWPLISCYRASMRTQSPKVEIIDSRVKQVSDNIDEGIVRELLLDFSA 62
           SDVPSIAAVV SRQWPLIS YRA +RTQSPKVE+IDS  K VSD  DEG++RELLLDF +
Sbjct: 665 SDVPSIAAVVSSRQWPLISRYRACVRTQSPKVEMIDSLYKPVSDTEDEGMMRELLLDFYS 724

Query: 61  NSGGRMPEQIVIF 23
           +SG R PEQI+IF
Sbjct: 725 SSGKRKPEQIIIF 737


>gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]
          Length = 912

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/74 (72%), Positives = 61/74 (82%)
 Frame = -1

Query: 244 ESDVPSIAAVVCSRQWPLISCYRASMRTQSPKVEIIDSRVKQVSDNIDEGIVRELLLDFS 65
           +SDVPSIAAVV SRQWP IS YRAS+RTQSPKVE+ID+  K+VSD  D+GI+RELLLDF 
Sbjct: 655 QSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNLFKKVSDTEDDGIMRELLLDFY 714

Query: 64  ANSGGRMPEQIVIF 23
             SG R PE IVIF
Sbjct: 715 VGSGKRKPEHIVIF 728


Top