BLASTX nr result

ID: Coptis23_contig00024673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024673
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|2...   139   8e-31
gb|ABK94819.1| unknown [Populus trichocarpa]                          139   8e-31
ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4...   133   4e-29
ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ric...   132   9e-29

>ref|XP_002304410.1| predicted protein [Populus trichocarpa] gi|222841842|gb|EEE79389.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  139 bits (349), Expect = 8e-31
 Identities = 69/93 (74%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   FVISDMIIIKEGLDAQREL--SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIA 174
           F+I+D IIIKEGL  +R L  S K + S D   ES++KIRADR+MRLMA+AANVADFIIA
Sbjct: 135 FIIADFIIIKEGLKEERRLLTSSKEDTSKDAT-ESLRKIRADRVMRLMAVAANVADFIIA 193

Query: 175 VADIEPNPICNHAVTLGISGLVSAWAGWYRNWP 273
           +ADIEPNP CNHAVTLG+SGLVSAWAGWYRNWP
Sbjct: 194 LADIEPNPFCNHAVTLGVSGLVSAWAGWYRNWP 226


>gb|ABK94819.1| unknown [Populus trichocarpa]
          Length = 227

 Score =  139 bits (349), Expect = 8e-31
 Identities = 69/93 (74%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   FVISDMIIIKEGLDAQREL--SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIA 174
           F+I+D IIIKEGL  +R L  S K + S D   ES++KIRADR+MRLMA+AANVADFIIA
Sbjct: 135 FIIADFIIIKEGLKQERRLLTSSKEDTSKDAT-ESLRKIRADRVMRLMAVAANVADFIIA 193

Query: 175 VADIEPNPICNHAVTLGISGLVSAWAGWYRNWP 273
           +ADIEPNP CNHAVTLG+SGLVSAWAGWYRNWP
Sbjct: 194 LADIEPNPFCNHAVTLGVSGLVSAWAGWYRNWP 226


>ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|222834122|gb|EEE72599.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  134 bits (336), Expect = 2e-29
 Identities = 66/93 (70%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
 Frame = +1

Query: 1   FVISDMIIIKEGLDAQREL--SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIA 174
           F+I+D II+KEGL+ +R L  S K + S+D + ES +KIR +R+MRLMA+AANVAD IIA
Sbjct: 135 FIIADFIIMKEGLETERRLLISSKEDGSEDAK-ESTRKIRVERVMRLMAVAANVADLIIA 193

Query: 175 VADIEPNPICNHAVTLGISGLVSAWAGWYRNWP 273
           +ADIEPNP CNHAVTLGISGLVSAWAGWYRNWP
Sbjct: 194 LADIEPNPFCNHAVTLGISGLVSAWAGWYRNWP 226


>ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus]
           gi|449516001|ref|XP_004165036.1| PREDICTED: peroxisomal
           membrane protein 11-4-like [Cucumis sativus]
          Length = 227

 Score =  133 bits (334), Expect = 4e-29
 Identities = 59/92 (64%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = +1

Query: 1   FVISDMIIIKEGLDAQREL-SRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAV 177
           F+++D+I++K G++A+R+L S K +  +D + ESI KI++DR+MRLMA+AANVAD II +
Sbjct: 135 FIVADVIMLKRGIEAERKLRSSKEDSKEDSKEESINKIKSDRIMRLMAVAANVADLIIGL 194

Query: 178 ADIEPNPICNHAVTLGISGLVSAWAGWYRNWP 273
           A+IEPNP CNH +TLGISGLVSAWAGWYRNWP
Sbjct: 195 AEIEPNPFCNHTITLGISGLVSAWAGWYRNWP 226


>ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223550071|gb|EEF51558.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 226

 Score =  132 bits (331), Expect = 9e-29
 Identities = 62/91 (68%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   FVISDMIIIKEGLDAQRELSRKAELSDDKQLESIKKIRADRLMRLMAIAANVADFIIAVA 180
           FVI+D I+I+EG+  +R+L    E    +  E+IKKIRADR+MRLMA+AAN+AD IIA+A
Sbjct: 135 FVIADFIMIREGIRKERKLVSTKEDDPKEVQENIKKIRADRVMRLMAVAANIADLIIALA 194

Query: 181 DIEPNPICNHAVTLGISGLVSAWAGWYRNWP 273
           +IEPNP CNH VTLGISGLVSAWAGWYRNWP
Sbjct: 195 EIEPNPFCNHTVTLGISGLVSAWAGWYRNWP 225


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