BLASTX nr result

ID: Coptis23_contig00024667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024667
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513454.1| conserved hypothetical protein [Ricinus comm...   437   e-120
emb|CBI16420.3| unnamed protein product [Vitis vinifera]              425   e-116
ref|XP_002283009.1| PREDICTED: uncharacterized protein LOC100243...   420   e-115
ref|XP_003539058.1| PREDICTED: uncharacterized protein LOC100780...   411   e-112
ref|XP_002297792.1| predicted protein [Populus trichocarpa] gi|2...   366   6e-99

>ref|XP_002513454.1| conserved hypothetical protein [Ricinus communis]
            gi|223547362|gb|EEF48857.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 486

 Score =  437 bits (1123), Expect = e-120
 Identities = 215/338 (63%), Positives = 263/338 (77%), Gaps = 5/338 (1%)
 Frame = +1

Query: 256  TWKKIGAFPHFYHIGELRCLTHTNRVVNAVSGQQ---ISREGISGLEFDSKGIYLASVTK 426
            ++ +IGAFPHFYH+  + C TH NR+  AV+      I+ +GIS LEFD+KGIYL SVTK
Sbjct: 47   SYTEIGAFPHFYHVDGVPCQTHLNRLARAVNMDPPFPITSQGISALEFDTKGIYLVSVTK 106

Query: 427  SGCLAVHDFEALYCLSNGLSAL--EDESKHLIHLSTGQQLDVVRWNLANQDEVACTSMTS 600
            SGCL VHDFE LYC ++ L     EDESKH++HLS  +QLDVVRWN+ANQDEVACTSM  
Sbjct: 107  SGCLTVHDFETLYCHTSVLVPCLKEDESKHVLHLSLNRQLDVVRWNIANQDEVACTSMKK 166

Query: 601  NEVRIFDIGYVSSDPIEVLRKRPTVTVNGCKVPRGLCDIAFSSGDKSRLLASDMYGVINL 780
            NEV IFDIGY+SS+P+EVLR R TVT++G  V +GL DIAF+  DKSRL+ASD  G++NL
Sbjct: 167  NEVLIFDIGYISSEPVEVLRTRRTVTLHGSDVHKGLTDIAFTIFDKSRLIASDTNGMVNL 226

Query: 781  WDRRMSKLPCVELTTNAHSPLNSIQLSLENQIVFGAGKHGTIYAWDLRGGRTSVAFQNNK 960
            WDRRM  LP +ELT+N  S +NSIQ+++ENQIVFGAG+HGTIY WDLRGGR+S  FQ++K
Sbjct: 227  WDRRMGVLPYLELTSNCRSTINSIQVNVENQIVFGAGRHGTIYMWDLRGGRSSSGFQSHK 286

Query: 961  EVYHPPLSSVKLAPLLGKIRLLKEQSDIVTREICSIDLDPSASYQLAFHLDNGWSGVVDT 1140
            EV HPP++S K+A +L KI  LK QS IV +E+ SID DPS  YQLAFHLD+GWSGV+D 
Sbjct: 287  EVCHPPITSWKVASMLEKIGTLKAQSAIVPKEVHSIDFDPSCPYQLAFHLDDGWSGVLDI 346

Query: 1141 RSSQVTHIHCPPPAWLNGVEGSFDYGLMRKPAWLPTCS 1254
             + QVTH+HCPPPAWLN    S D   +RKP+WLPT S
Sbjct: 347  YNCQVTHVHCPPPAWLNDSNISADLLYLRKPSWLPTYS 384


>emb|CBI16420.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score =  425 bits (1092), Expect = e-116
 Identities = 216/353 (61%), Positives = 260/353 (73%), Gaps = 20/353 (5%)
 Frame = +1

Query: 256  TWKKIGAFPHFYHIGELRCLTHTNRVVNAVSGQQ-----ISREGISGLEFDSKGIYLASV 420
            ++ +IGAF H YHI  ++C TH    +            ++ +GIS LEFDSKGIYLASV
Sbjct: 92   SYSEIGAFAHLYHINGVQCQTHVCEFLKLFFPHISLPTFVALQGISALEFDSKGIYLASV 151

Query: 421  TKSGCLAVHDFEALYCLSNGLSAL--EDESKHLIHLSTGQQLDVVRWNLANQDEVACTSM 594
            TK GCL VHDFE+LYC +  +S    E E++HL+HLST  QLDVVRWNLANQDEVACTSM
Sbjct: 152  TKLGCLTVHDFESLYCQTIEISTCLEEGETRHLLHLSTDHQLDVVRWNLANQDEVACTSM 211

Query: 595  TSNEVRIFDIGYVSSDPIEVLRKRPTVTVNGCKVPRGLCDIAFSSGDKSRLLASDMYGVI 774
             SNEV IFD+GY+SS+P+EVL+KR TV  +     +GL DIAF+S D SRL ASDM GVI
Sbjct: 212  KSNEVLIFDVGYISSEPVEVLQKRHTVNAH-----KGLSDIAFTSTDDSRLFASDMCGVI 266

Query: 775  NLWDRRMSKLPCVELTTNAHSPLNSIQLSLENQIVFGAGKHGTIYAWDLRGGRTSVAFQN 954
            +LWDRR S  PC+ELTTN+ + LNSIQL+ ENQI+FGAGK G IY WDLRGGRTS AFQ+
Sbjct: 267  HLWDRRASDFPCLELTTNSRTTLNSIQLNEENQIIFGAGKLGVIYMWDLRGGRTSAAFQS 326

Query: 955  NKE-------------VYHPPLSSVKLAPLLGKIRLLKEQSDIVTREICSIDLDPSASYQ 1095
            +KE             VYHPPL+S+KLA +L KI  LK Q+DI+++EI S+DLDPS  YQ
Sbjct: 327  HKEIAMLNTCSPIIILVYHPPLASIKLASMLEKIEPLKAQADIISKEIHSVDLDPSCPYQ 386

Query: 1096 LAFHLDNGWSGVVDTRSSQVTHIHCPPPAWLNGVEGSFDYGLMRKPAWLPTCS 1254
            LAFHLD+GWSGV+D  + QVTHIHCPPPAWLNG   S D   +RKP+WLPT S
Sbjct: 387  LAFHLDDGWSGVLDIHNFQVTHIHCPPPAWLNGSNSSADVSYVRKPSWLPTYS 439


>ref|XP_002283009.1| PREDICTED: uncharacterized protein LOC100243206 [Vitis vinifera]
          Length = 462

 Score =  420 bits (1079), Expect = e-115
 Identities = 209/322 (64%), Positives = 251/322 (77%), Gaps = 5/322 (1%)
 Frame = +1

Query: 304  LRCLTHTNRVVNAVSGQ---QISREGISGLEFDSKGIYLASVTKSGCLAVHDFEALYCLS 474
            ++  +  NR+ N +       I ++GIS LEFDSKGIYLASVTK GCL VHDFE+LYC +
Sbjct: 47   MQSYSEMNRIANGMYMDLQVPIRKQGISALEFDSKGIYLASVTKLGCLTVHDFESLYCQT 106

Query: 475  NGLSAL--EDESKHLIHLSTGQQLDVVRWNLANQDEVACTSMTSNEVRIFDIGYVSSDPI 648
              +S    E E++HL+HLST  QLDVVRWNLANQDEVACTSM SNEV IFD+GY+SS+P+
Sbjct: 107  IEISTCLEEGETRHLLHLSTDHQLDVVRWNLANQDEVACTSMKSNEVLIFDVGYISSEPV 166

Query: 649  EVLRKRPTVTVNGCKVPRGLCDIAFSSGDKSRLLASDMYGVINLWDRRMSKLPCVELTTN 828
            EVL+KR TV  +     +GL DIAF+S D SRL ASDM GVI+LWDRR S  PC+ELTTN
Sbjct: 167  EVLQKRHTVNAH-----KGLSDIAFTSTDDSRLFASDMCGVIHLWDRRASDFPCLELTTN 221

Query: 829  AHSPLNSIQLSLENQIVFGAGKHGTIYAWDLRGGRTSVAFQNNKEVYHPPLSSVKLAPLL 1008
            + + LNSIQL+ ENQI+FGAGK G IY WDLRGGRTS AFQ++KEVYHPPL+S+KLA +L
Sbjct: 222  SRTTLNSIQLNEENQIIFGAGKLGVIYMWDLRGGRTSAAFQSHKEVYHPPLASIKLASML 281

Query: 1009 GKIRLLKEQSDIVTREICSIDLDPSASYQLAFHLDNGWSGVVDTRSSQVTHIHCPPPAWL 1188
             KI  LK Q+DI+++EI S+DLDPS  YQLAFHLD+GWSGV+D  + QVTHIHCPPPAWL
Sbjct: 282  EKIEPLKAQADIISKEIHSVDLDPSCPYQLAFHLDDGWSGVLDIHNFQVTHIHCPPPAWL 341

Query: 1189 NGVEGSFDYGLMRKPAWLPTCS 1254
            NG   S D   +RKP+WLPT S
Sbjct: 342  NGSNSSADVSYVRKPSWLPTYS 363


>ref|XP_003539058.1| PREDICTED: uncharacterized protein LOC100780441 [Glycine max]
          Length = 477

 Score =  411 bits (1057), Expect = e-112
 Identities = 199/337 (59%), Positives = 251/337 (74%), Gaps = 4/337 (1%)
 Frame = +1

Query: 256  TWKKIGAFPHFYHIGELRCLTHTNRVVNAVSGQ---QISREGISGLEFDSKGIYLASVTK 426
            ++ ++ AFPH Y +    C +HTNR++   +G       ++GIS ++FD+KGIYL SVTK
Sbjct: 52   SYSEVAAFPHLYQVDGAPCQSHTNRLIGEANGDGHLPFRKQGISAVDFDNKGIYLVSVTK 111

Query: 427  SGCLAVHDFEALYCLSNGLSAL-EDESKHLIHLSTGQQLDVVRWNLANQDEVACTSMTSN 603
            SGCL VHDFEALYC    L+ L EDESKHL+HLS  QQLD VRWN  NQDEV C S+ SN
Sbjct: 112  SGCLTVHDFEALYCQIPELTCLKEDESKHLMHLSLNQQLDAVRWNPLNQDEVVCASVKSN 171

Query: 604  EVRIFDIGYVSSDPIEVLRKRPTVTVNGCKVPRGLCDIAFSSGDKSRLLASDMYGVINLW 783
            ++ IFD+GYVSSDP+EVLR R T TVNG  + +GL D+AF+  D +R+LASD +G IN+W
Sbjct: 172  KLLIFDVGYVSSDPVEVLRTRQTTTVNGSSIHKGLSDVAFTKND-TRILASDTHGAINVW 230

Query: 784  DRRMSKLPCVELTTNAHSPLNSIQLSLENQIVFGAGKHGTIYAWDLRGGRTSVAFQNNKE 963
            DRR++ LPC+EL + +   LNSIQL+ +NQI+FGAGKHG +Y WD+RGGR S  FQ+ KE
Sbjct: 231  DRRVNTLPCLELASASCGTLNSIQLNADNQIIFGAGKHGLVYVWDIRGGRASATFQSLKE 290

Query: 964  VYHPPLSSVKLAPLLGKIRLLKEQSDIVTREICSIDLDPSASYQLAFHLDNGWSGVVDTR 1143
            + HPP++SVKLA LL KI  LK Q++IV +EI SID+DPS  YQLAFHL +GWSGV+DT 
Sbjct: 291  ICHPPVTSVKLATLLEKIGSLKAQANIVPKEIHSIDIDPSCPYQLAFHLVDGWSGVLDTN 350

Query: 1144 SSQVTHIHCPPPAWLNGVEGSFDYGLMRKPAWLPTCS 1254
            + QVTHIHCPPPAWLN      D   +RKP+WL T S
Sbjct: 351  NFQVTHIHCPPPAWLNDSYIPADLSYLRKPSWLSTGS 387


>ref|XP_002297792.1| predicted protein [Populus trichocarpa] gi|222845050|gb|EEE82597.1|
            predicted protein [Populus trichocarpa]
          Length = 419

 Score =  366 bits (940), Expect = 6e-99
 Identities = 187/308 (60%), Positives = 233/308 (75%), Gaps = 18/308 (5%)
 Frame = +1

Query: 385  EFDSKGIYLASVTKSGCLAVHDFEALYCLSNGL----SALEDESKHLIHLSTGQQLDVVR 552
            E+  +GIYL SVTKSGCL VHDFE+LYC +N         EDESKH++H S G+QLD VR
Sbjct: 43   EYVFQGIYLVSVTKSGCLTVHDFESLYCQANDSFPYERKCEDESKHVLHNSLGRQLDSVR 102

Query: 553  WNLANQDEVACTSMTSNEVRIFDIGYVSSDPIEVLRKRPTVTVNGCKVPRGLCDIAFSSG 732
            WNLANQDEVACTSM +NEV+IFDIGY+SS+P+EVL+ R  VTV+G  + +GL DIAF+S 
Sbjct: 103  WNLANQDEVACTSMKTNEVQIFDIGYISSEPVEVLKTRRAVTVHGSDIHKGLTDIAFTS- 161

Query: 733  DKSRLLASDMYGVINLWDRRMSKLPCVELTTNAHSPLNSIQLSLENQIVFGAGKHGTIYA 912
             +SRL+ASD  G +N+WDRRMS LPC+ELT+N+ S LNSI+L++ENQ+VFGAG+HG +Y 
Sbjct: 162  -ESRLIASDTNGGVNVWDRRMSALPCLELTSNSRSTLNSIKLNVENQMVFGAGRHGIVYM 220

Query: 913  WDLRGGRTSVAFQNNKEV-------------YHPPLSSVKLAPLLGKIRLLKEQSDIVTR 1053
            WDLRGGR   AFQ +KEV              HPP++S KL+ +L +I  LK QSDIV++
Sbjct: 221  WDLRGGRAPSAFQIHKEVSSWALDKLQIMVMCHPPVTSWKLSSMLERIGSLKAQSDIVSK 280

Query: 1054 EICSIDLDPSASYQLAFHLDNGWSGVVDTRSSQVTHIHCPPPAWLNGVEGSF-DYGLMRK 1230
            E+ SID DPS  YQLAFHLD+GWSG++D  + QVTH+HCPPPAWLN   GSF D   +RK
Sbjct: 281  EVHSIDFDPSCPYQLAFHLDDGWSGILDIYNFQVTHVHCPPPAWLN---GSFTDLLSLRK 337

Query: 1231 PAWLPTCS 1254
            P+WL T S
Sbjct: 338  PSWLATHS 345


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