BLASTX nr result
ID: Coptis23_contig00024664
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00024664
(589 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI14956.3| unnamed protein product [Vitis vinifera] 275 5e-72
ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-... 275 5e-72
ref|XP_002530026.1| leucine-rich repeat-containing protein, puta... 272 3e-71
ref|XP_002321633.1| predicted protein [Populus trichocarpa] gi|2... 271 6e-71
ref|XP_002511324.1| leucine-rich repeat-containing protein, puta... 271 8e-71
>emb|CBI14956.3| unnamed protein product [Vitis vinifera]
Length = 417
Score = 275 bits (702), Expect = 5e-72
Identities = 141/195 (72%), Positives = 160/195 (82%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPDS 180
V+LS R L +P+AFG ++ LV LNLS NQ+E IPDSI LENL+E LSSNLL LPDS
Sbjct: 118 VDLSGRRLRFLPEAFGKIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLELLPDS 177
Query: 181 VGMLCDLKILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRLSVN 360
+G+L +LKILD S NKL LPD+I HC SLV+LD SFN+L Y+PTNIGY LVNL+RLS+N
Sbjct: 178 IGLLVNLKILDASGNKLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKRLSIN 237
Query: 361 LNKIHSLPTSICEMQSLQHLDVHFNELRGLPYTIGLLTNLEILNLSKNFSDLTELPDTIG 540
LNKI SLPTSI EM+SL HLD HFNELRGLP IG LTNLE LNLS NFSDLTELP+TIG
Sbjct: 238 LNKIRSLPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIG 297
Query: 541 DLINLKELDLSNNQI 585
DL NL+ELDLSNNQI
Sbjct: 298 DLTNLRELDLSNNQI 312
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 31 VPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNL--LVSLPDSVGMLCDLK 204
+P + G ++ L L+ N++ +P +IG L NL+ LSSN L LP+++G L +L+
Sbjct: 244 LPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIGDLTNLR 303
Query: 205 ILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNI 321
LD+S+N+++ LPDT +L L+ N L P +
Sbjct: 304 ELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPMEV 342
Score = 61.6 bits (148), Expect = 9e-08
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGM-LKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPD 177
+++S L+ +P G L L L+++ N+I +P SIG + +L N L LP
Sbjct: 210 LDVSFNNLAYLPTNIGYELVNLKRLSINLNKIRSLPTSIGEMRSLCHLDAHFNELRGLPS 269
Query: 178 SVGMLCDLKILDVSSN--KLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRL 351
++G L +L+ L++SSN L LP+TI ++L +LD S N + +P G RL NL +L
Sbjct: 270 AIGRLTNLETLNLSSNFSDLTELPETIGDLTNLRELDLSNNQIQALPDTFG-RLDNLNKL 328
Query: 352 SVNLNKIHSLPTSI 393
+++ N + P +
Sbjct: 329 NLDQNPLVIPPMEV 342
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/104 (36%), Positives = 64/104 (61%)
Frame = +1
Query: 277 LDASFNHLTYIPTNIGYRLVNLQRLSVNLNKIHSLPTSICEMQSLQHLDVHFNELRGLPY 456
+D S L ++P G ++ +L L+++ N++ +P SI +++L+ L++ N L LP
Sbjct: 118 VDLSGRRLRFLPEAFG-KIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLELLPD 176
Query: 457 TIGLLTNLEILNLSKNFSDLTELPDTIGDLINLKELDLSNNQIS 588
+IGLL NL+IL+ S N L LPD+I +L ELD+S N ++
Sbjct: 177 SIGLLVNLKILDASGN--KLLALPDSICHCRSLVELDVSFNNLA 218
>ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Vitis vinifera]
Length = 517
Score = 275 bits (702), Expect = 5e-72
Identities = 141/195 (72%), Positives = 160/195 (82%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPDS 180
V+LS R L +P+AFG ++ LV LNLS NQ+E IPDSI LENL+E LSSNLL LPDS
Sbjct: 218 VDLSGRRLRFLPEAFGKIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLELLPDS 277
Query: 181 VGMLCDLKILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRLSVN 360
+G+L +LKILD S NKL LPD+I HC SLV+LD SFN+L Y+PTNIGY LVNL+RLS+N
Sbjct: 278 IGLLVNLKILDASGNKLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKRLSIN 337
Query: 361 LNKIHSLPTSICEMQSLQHLDVHFNELRGLPYTIGLLTNLEILNLSKNFSDLTELPDTIG 540
LNKI SLPTSI EM+SL HLD HFNELRGLP IG LTNLE LNLS NFSDLTELP+TIG
Sbjct: 338 LNKIRSLPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIG 397
Query: 541 DLINLKELDLSNNQI 585
DL NL+ELDLSNNQI
Sbjct: 398 DLTNLRELDLSNNQI 412
Score = 62.4 bits (150), Expect = 6e-08
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 31 VPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNL--LVSLPDSVGMLCDLK 204
+P + G ++ L L+ N++ +P +IG L NL+ LSSN L LP+++G L +L+
Sbjct: 344 LPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIGDLTNLR 403
Query: 205 ILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNI 321
LD+S+N+++ LPDT +L L+ N L P +
Sbjct: 404 ELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPMEV 442
Score = 61.6 bits (148), Expect = 9e-08
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGM-LKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPD 177
+++S L+ +P G L L L+++ N+I +P SIG + +L N L LP
Sbjct: 310 LDVSFNNLAYLPTNIGYELVNLKRLSINLNKIRSLPTSIGEMRSLCHLDAHFNELRGLPS 369
Query: 178 SVGMLCDLKILDVSSN--KLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRL 351
++G L +L+ L++SSN L LP+TI ++L +LD S N + +P G RL NL +L
Sbjct: 370 AIGRLTNLETLNLSSNFSDLTELPETIGDLTNLRELDLSNNQIQALPDTFG-RLDNLNKL 428
Query: 352 SVNLNKIHSLPTSI 393
+++ N + P +
Sbjct: 429 NLDQNPLVIPPMEV 442
Score = 60.8 bits (146), Expect = 2e-07
Identities = 38/104 (36%), Positives = 64/104 (61%)
Frame = +1
Query: 277 LDASFNHLTYIPTNIGYRLVNLQRLSVNLNKIHSLPTSICEMQSLQHLDVHFNELRGLPY 456
+D S L ++P G ++ +L L+++ N++ +P SI +++L+ L++ N L LP
Sbjct: 218 VDLSGRRLRFLPEAFG-KIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLELLPD 276
Query: 457 TIGLLTNLEILNLSKNFSDLTELPDTIGDLINLKELDLSNNQIS 588
+IGLL NL+IL+ S N L LPD+I +L ELD+S N ++
Sbjct: 277 SIGLLVNLKILDASGN--KLLALPDSICHCRSLVELDVSFNNLA 318
>ref|XP_002530026.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
gi|223530442|gb|EEF32326.1| leucine-rich
repeat-containing protein, putative [Ricinus communis]
Length = 456
Score = 272 bits (696), Expect = 3e-71
Identities = 135/195 (69%), Positives = 165/195 (84%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPDS 180
V+LS R L +P+AFG L GLV+LNLS NQ+EV+PDSI GL+ L+E +SSNLL+SLPDS
Sbjct: 154 VDLSGRQLKLLPEAFGKLHGLVLLNLSRNQLEVLPDSIAGLQKLEELDVSSNLLLSLPDS 213
Query: 181 VGMLCDLKILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRLSVN 360
+G+L LK+L+VS NKL LP++I CSSLV+LDASFN+L +PTNIGY L NL+RLS+
Sbjct: 214 IGLLRTLKVLNVSGNKLNYLPESIALCSSLVELDASFNNLVSLPTNIGYGLTNLERLSIQ 273
Query: 361 LNKIHSLPTSICEMQSLQHLDVHFNELRGLPYTIGLLTNLEILNLSKNFSDLTELPDTIG 540
LNKIH LP SICEM+SL++LDVHFNEL GLPY IG LTNLE+L+LS NFSDLTELP+T+G
Sbjct: 274 LNKIHILPPSICEMKSLRYLDVHFNELHGLPYAIGRLTNLEVLDLSSNFSDLTELPETVG 333
Query: 541 DLINLKELDLSNNQI 585
DL NL+EL+LSNNQI
Sbjct: 334 DLANLRELNLSNNQI 348
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNL--LVSLP 174
++L+K + +P + +K L L++ N++ +P +IG L NL+ LSSN L LP
Sbjct: 272 IQLNK--IHILPPSICEMKSLRYLDVHFNELHGLPYAIGRLTNLEVLDLSSNFSDLTELP 329
Query: 175 DSVGMLCDLKILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNI 321
++VG L +L+ L++S+N+++ LPDT +L +L N L P I
Sbjct: 330 ETVGDLANLRELNLSNNQIRALPDTFGRLENLANLILDENPLVIPPKEI 378
>ref|XP_002321633.1| predicted protein [Populus trichocarpa] gi|222868629|gb|EEF05760.1|
predicted protein [Populus trichocarpa]
Length = 515
Score = 271 bits (693), Expect = 6e-71
Identities = 139/196 (70%), Positives = 163/196 (83%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPDS 180
V+LS R L +P+ FG + GL VLNLS+NQ++VIPDSI GLE L+E L+SNLL +LPDS
Sbjct: 215 VDLSNRRLRFLPEGFGRVVGLKVLNLSNNQLQVIPDSITGLEILEELNLASNLLEALPDS 274
Query: 181 VGMLCDLKILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRLSVN 360
+G+L +LKILDVSSNK++ LP TI HC SL++LD SFN LTY+PTNIG+ + NLQRLS+
Sbjct: 275 IGLLQNLKILDVSSNKIEVLPGTICHCRSLLELDVSFNCLTYLPTNIGHEMSNLQRLSIQ 334
Query: 361 LNKIHSLPTSICEMQSLQHLDVHFNELRGLPYTIGLLTNLEILNLSKNFSDLTELPDTIG 540
LNKI SLPTSI EM+SL+HLD HFNELRGLP IG LTNLEILNLS NFSDL ELP+T G
Sbjct: 335 LNKIFSLPTSIGEMRSLRHLDAHFNELRGLPLAIGKLTNLEILNLSGNFSDLKELPETFG 394
Query: 541 DLINLKELDLSNNQIS 588
DL NLKELDLSNNQIS
Sbjct: 395 DLTNLKELDLSNNQIS 410
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGM-LKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPD 177
+++S L+ +P G + L L++ N+I +P SIG + +L+ N L LP
Sbjct: 307 LDVSFNCLTYLPTNIGHEMSNLQRLSIQLNKIFSLPTSIGEMRSLRHLDAHFNELRGLPL 366
Query: 178 SVGMLCDLKILDVSSN--KLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRL 351
++G L +L+IL++S N LK LP+T ++L +LD S N ++ +P + G RL NL +L
Sbjct: 367 AIGKLTNLEILNLSGNFSDLKELPETFGDLTNLKELDLSNNQISALPDSFG-RLDNLTKL 425
Query: 352 SVNLNKIHSLPTSI 393
+++ N + P +
Sbjct: 426 NLDQNPLVIPPPEV 439
>ref|XP_002511324.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
gi|223550439|gb|EEF51926.1| leucine-rich
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 271 bits (692), Expect = 8e-71
Identities = 136/195 (69%), Positives = 163/195 (83%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGMLKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPDS 180
V+LS R L +P+AF + GL VL+LS+NQ+EVIPDSI GLENL E L+SNLL +LPD
Sbjct: 217 VDLSNRRLRFLPEAFCRISGLKVLDLSNNQLEVIPDSIAGLENLDELNLASNLLEALPDF 276
Query: 181 VGMLCDLKILDVSSNKLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRLSVN 360
+G+L +LK+L+VSSNKL++LPD+I HC SL++LD SFN LTY+PTNIGY LVN++RLS+
Sbjct: 277 IGLLVNLKVLNVSSNKLESLPDSISHCRSLLELDVSFNRLTYLPTNIGYELVNVKRLSIQ 336
Query: 361 LNKIHSLPTSICEMQSLQHLDVHFNELRGLPYTIGLLTNLEILNLSKNFSDLTELPDTIG 540
LNKI SLPTSI EM+SLQHLD HFNEL+GLP + G L NLEIL LS NFSDL ELPDT+G
Sbjct: 337 LNKIRSLPTSIGEMRSLQHLDAHFNELQGLPLSFGRLINLEILKLSSNFSDLKELPDTLG 396
Query: 541 DLINLKELDLSNNQI 585
DL NLKELDLSNNQI
Sbjct: 397 DLTNLKELDLSNNQI 411
Score = 65.5 bits (158), Expect = 7e-09
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Frame = +1
Query: 1 VELSKRGLSCVPDAFGM-LKGLVVLNLSHNQIEVIPDSIGGLENLQEFYLSSNLLVSLPD 177
+++S L+ +P G L + L++ N+I +P SIG + +LQ N L LP
Sbjct: 309 LDVSFNRLTYLPTNIGYELVNVKRLSIQLNKIRSLPTSIGEMRSLQHLDAHFNELQGLPL 368
Query: 178 SVGMLCDLKILDVSSN--KLKTLPDTIVHCSSLVDLDASFNHLTYIPTNIGYRLVNLQRL 351
S G L +L+IL +SSN LK LPDT+ ++L +LD S N + +P + G RL NL +L
Sbjct: 369 SFGRLINLEILKLSSNFSDLKELPDTLGDLTNLKELDLSNNQIETLPDSFG-RLDNLTKL 427
Query: 352 SVNLNKIHSLPTSI 393
+++ N + P +
Sbjct: 428 NLDQNPLILPPPEV 441
Score = 62.0 bits (149), Expect = 7e-08
Identities = 38/104 (36%), Positives = 62/104 (59%)
Frame = +1
Query: 277 LDASFNHLTYIPTNIGYRLVNLQRLSVNLNKIHSLPTSICEMQSLQHLDVHFNELRGLPY 456
+D S L ++P R+ L+ L ++ N++ +P SI +++L L++ N L LP
Sbjct: 217 VDLSNRRLRFLPEAF-CRISGLKVLDLSNNQLEVIPDSIAGLENLDELNLASNLLEALPD 275
Query: 457 TIGLLTNLEILNLSKNFSDLTELPDTIGDLINLKELDLSNNQIS 588
IGLL NL++LN+S N L LPD+I +L ELD+S N+++
Sbjct: 276 FIGLLVNLKVLNVSSN--KLESLPDSISHCRSLLELDVSFNRLT 317