BLASTX nr result

ID: Coptis23_contig00024644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024644
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265237.1| PREDICTED: U-box domain-containing protein 4...   498   e-138
emb|CAN65599.1| hypothetical protein VITISV_025370 [Vitis vinifera]   498   e-138
emb|CAN62879.1| hypothetical protein VITISV_010493 [Vitis vinifera]   496   e-138
emb|CBI40896.3| unnamed protein product [Vitis vinifera]              495   e-138
ref|XP_002265222.1| PREDICTED: U-box domain-containing protein 4...   495   e-138

>ref|XP_002265237.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 882

 Score =  498 bits (1281), Expect = e-138
 Identities = 267/380 (70%), Positives = 315/380 (82%)
 Frame = -3

Query: 1142 VGLKLKCGDDEKFKCTLLGLRHLLTEKMVSNEWVIEEDIIPILVNRLASSKQDNRFNIIV 963
            V L+LK G+D++FK  L GLR L+ ++MV +EW+ +E +I IL NRL SSK +NR  II 
Sbjct: 227  VVLQLKYGNDDEFKFALSGLRSLIRDQMVDDEWINDEGVILILSNRLGSSKPNNRLTIIQ 286

Query: 962  VLRILASENDDNKEKMAAVESLRTLVRSLTRDAEERRETVGLLLALSEIPAVRKRIGRIQ 783
            +LR L  EN  NKEK+A   SL T+V+SLTRD EERRE VGLLL LS++PAV +RIGRIQ
Sbjct: 287  MLRNLV-ENAKNKEKLADPNSLSTIVKSLTRDVEERREAVGLLLDLSDLPAVHRRIGRIQ 345

Query: 782  GCIVMLVALLNGDDRLASKDARMLLRALSSNTQDVLHMAEAGYFKPLVQHLNEGSDMSKI 603
            GCIVMLVA+LNG+D +AS+DA  LL ALSSNTQ+ LHMAEAGYFKPLV +L EGSDMSKI
Sbjct: 346  GCIVMLVAILNGEDPVASRDAGKLLSALSSNTQNALHMAEAGYFKPLVHYLKEGSDMSKI 405

Query: 602  LMATAISRMELIDQTSASLGEEGAIEPLVKLFRFGKLEAKLCALGALRNLSCLAENVHRL 423
            LMATA+SRMEL DQ+  SLG++GAIEPLVK+F  GKLE+KL AL AL+NLS L EN+ RL
Sbjct: 406  LMATALSRMELTDQSRGSLGKDGAIEPLVKMFNAGKLESKLSALSALQNLSMLTENIQRL 465

Query: 422  VKSGVVESLLQLLFSITSVLMTLREPAAAILASIAQSDSILVNQDVAQQMLSLLNLSSPV 243
            + SG+V +LLQLLFS+TSVLMTLREPA+AILA IAQS+SILVNQDVAQQMLSLLNLSSPV
Sbjct: 466  ISSGIVVTLLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLSSPV 525

Query: 242  IQYHLLCALNNIASHSSASKVRNKMKESGAVQLLLPFLTENKTQIRAIALNFLYNVSKDF 63
            IQYHLL ALN+IA+HSSASKVRNKMKE+GA+QLLLPFL+E  T+ R  ALN LY +SK  
Sbjct: 526  IQYHLLQALNSIAAHSSASKVRNKMKENGAIQLLLPFLSETNTKTRTGALNLLYTLSKYL 585

Query: 62   AGELTEQLGETYLNIVVKII 3
              E TEQL ET+LNI+V II
Sbjct: 586  PAEFTEQLSETHLNIIVNII 605


>emb|CAN65599.1| hypothetical protein VITISV_025370 [Vitis vinifera]
          Length = 882

 Score =  498 bits (1281), Expect = e-138
 Identities = 267/380 (70%), Positives = 315/380 (82%)
 Frame = -3

Query: 1142 VGLKLKCGDDEKFKCTLLGLRHLLTEKMVSNEWVIEEDIIPILVNRLASSKQDNRFNIIV 963
            V L+LK G+D++FK  L GLR L+ ++MV +EW+ +E +I IL NRL SSK +NR  II 
Sbjct: 227  VVLQLKYGNDDEFKFALSGLRSLIRDQMVDDEWINDEGVILILSNRLGSSKPNNRLTIIQ 286

Query: 962  VLRILASENDDNKEKMAAVESLRTLVRSLTRDAEERRETVGLLLALSEIPAVRKRIGRIQ 783
            +LR L  EN  NKEK+A   SL T+V+SLTRD EERRE VGLLL LS++PAV +RIGRIQ
Sbjct: 287  MLRNLV-ENAKNKEKLADPNSLSTIVKSLTRDVEERREAVGLLLDLSDLPAVHRRIGRIQ 345

Query: 782  GCIVMLVALLNGDDRLASKDARMLLRALSSNTQDVLHMAEAGYFKPLVQHLNEGSDMSKI 603
            GCIVMLVA+LNG+D +AS+DA  LL ALSSNTQ+ LHMAEAGYFKPLV +L EGSDMSKI
Sbjct: 346  GCIVMLVAILNGEDPVASRDAGKLLSALSSNTQNALHMAEAGYFKPLVHYLKEGSDMSKI 405

Query: 602  LMATAISRMELIDQTSASLGEEGAIEPLVKLFRFGKLEAKLCALGALRNLSCLAENVHRL 423
            LMATA+SRMEL DQ+  SLG++GAIEPLVK+F  GKLE+KL AL AL+NLS L EN+ RL
Sbjct: 406  LMATALSRMELTDQSRGSLGKDGAIEPLVKMFNAGKLESKLSALSALQNLSMLTENIQRL 465

Query: 422  VKSGVVESLLQLLFSITSVLMTLREPAAAILASIAQSDSILVNQDVAQQMLSLLNLSSPV 243
            + SG+V +LLQLLFS+TSVLMTLREPA+AILA IAQS+SILVNQDVAQQMLSLLNLSSPV
Sbjct: 466  ISSGIVVTLLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLSSPV 525

Query: 242  IQYHLLCALNNIASHSSASKVRNKMKESGAVQLLLPFLTENKTQIRAIALNFLYNVSKDF 63
            IQYHLL ALN+IA+HSSASKVRNKMKE+GA+QLLLPFL+E  T+ R  ALN LY +SK  
Sbjct: 526  IQYHLLQALNSIAAHSSASKVRNKMKENGAIQLLLPFLSETNTKTRTGALNLLYTLSKYL 585

Query: 62   AGELTEQLGETYLNIVVKII 3
              E TEQL ET+LNI+V II
Sbjct: 586  PAEFTEQLSETHLNIIVNII 605


>emb|CAN62879.1| hypothetical protein VITISV_010493 [Vitis vinifera]
          Length = 845

 Score =  496 bits (1277), Expect = e-138
 Identities = 266/380 (70%), Positives = 314/380 (82%)
 Frame = -3

Query: 1142 VGLKLKCGDDEKFKCTLLGLRHLLTEKMVSNEWVIEEDIIPILVNRLASSKQDNRFNIIV 963
            V L+LK G+DE+FK  L GLR L+ ++MV +EW+ +E ++ IL NRL SSK +NR  II 
Sbjct: 190  VVLQLKYGNDEEFKFALSGLRSLIRDQMVDDEWINDEGVVLILSNRLGSSKPNNRLTIIQ 249

Query: 962  VLRILASENDDNKEKMAAVESLRTLVRSLTRDAEERRETVGLLLALSEIPAVRKRIGRIQ 783
            +LR L  EN  NKEK+A   SL T+V+ LTRD EERRE VGLLL LS++PAV +RIGRIQ
Sbjct: 250  MLRNLV-ENAKNKEKLADPNSLSTIVKYLTRDVEERREAVGLLLDLSDLPAVHRRIGRIQ 308

Query: 782  GCIVMLVALLNGDDRLASKDARMLLRALSSNTQDVLHMAEAGYFKPLVQHLNEGSDMSKI 603
            GCIVMLVA+LNG+D +AS+DA  LL ALSSNTQ+ LHMAEAGYFKPLV +L EGSDMSKI
Sbjct: 309  GCIVMLVAILNGEDPVASRDAGKLLSALSSNTQNALHMAEAGYFKPLVHYLKEGSDMSKI 368

Query: 602  LMATAISRMELIDQTSASLGEEGAIEPLVKLFRFGKLEAKLCALGALRNLSCLAENVHRL 423
            LMATA+SRMEL DQ+  SLG++GAIEPLVK+F  GKLE+KL AL AL+NLS L EN+ RL
Sbjct: 369  LMATALSRMELTDQSRGSLGKDGAIEPLVKMFNAGKLESKLSALSALQNLSMLTENIQRL 428

Query: 422  VKSGVVESLLQLLFSITSVLMTLREPAAAILASIAQSDSILVNQDVAQQMLSLLNLSSPV 243
            + SG+V +LLQLLFS+TSVLMTLREPA+AILA IAQS+SILVNQDVAQQMLSLLNLSSPV
Sbjct: 429  ISSGIVVTLLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLSSPV 488

Query: 242  IQYHLLCALNNIASHSSASKVRNKMKESGAVQLLLPFLTENKTQIRAIALNFLYNVSKDF 63
            IQYHLL ALN+IA+HSSASKVRNKMKE+GA+QLLLPFL+E  T+ R  ALN LY +SK  
Sbjct: 489  IQYHLLQALNSIAAHSSASKVRNKMKENGAIQLLLPFLSETNTKTRTGALNLLYTLSKYL 548

Query: 62   AGELTEQLGETYLNIVVKII 3
              E TEQL ET+LNI+V II
Sbjct: 549  PAEFTEQLSETHLNIIVNII 568


>emb|CBI40896.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  495 bits (1275), Expect = e-138
 Identities = 265/380 (69%), Positives = 314/380 (82%)
 Frame = -3

Query: 1142 VGLKLKCGDDEKFKCTLLGLRHLLTEKMVSNEWVIEEDIIPILVNRLASSKQDNRFNIIV 963
            V L+LK G+DE+FK  L GLR L+ ++MV +EW+ +E ++ IL NRL SSK +NR  II 
Sbjct: 59   VVLQLKYGNDEEFKFALSGLRSLIRDQMVDDEWINDEGVVLILSNRLGSSKPNNRLTIIQ 118

Query: 962  VLRILASENDDNKEKMAAVESLRTLVRSLTRDAEERRETVGLLLALSEIPAVRKRIGRIQ 783
            +LR L  EN  NKEK+A   SL T+V+ LTRD EERRE VGLLL LS++PAV +RIGRIQ
Sbjct: 119  MLRNLV-ENAKNKEKLADPNSLSTIVKYLTRDVEERREAVGLLLDLSDLPAVHRRIGRIQ 177

Query: 782  GCIVMLVALLNGDDRLASKDARMLLRALSSNTQDVLHMAEAGYFKPLVQHLNEGSDMSKI 603
            GCIVMLVA+LNG+D +AS+DA  LL ALSSNTQ+ LHMAEAGYFKPLV +L EGSDMSKI
Sbjct: 178  GCIVMLVAILNGEDSVASRDAGKLLSALSSNTQNALHMAEAGYFKPLVHYLKEGSDMSKI 237

Query: 602  LMATAISRMELIDQTSASLGEEGAIEPLVKLFRFGKLEAKLCALGALRNLSCLAENVHRL 423
            LMATA+SRMEL DQ+  SLG++GAIEPLVK+F  GKLE+KL AL AL+NLS L EN+ RL
Sbjct: 238  LMATALSRMELTDQSRGSLGKDGAIEPLVKMFNAGKLESKLSALSALQNLSMLTENIQRL 297

Query: 422  VKSGVVESLLQLLFSITSVLMTLREPAAAILASIAQSDSILVNQDVAQQMLSLLNLSSPV 243
            + SG+V +LLQLLFS+TSVLMTLREPA+AILA IAQS+SILVNQDVAQQMLSLLNLSSPV
Sbjct: 298  ISSGIVVALLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLSSPV 357

Query: 242  IQYHLLCALNNIASHSSASKVRNKMKESGAVQLLLPFLTENKTQIRAIALNFLYNVSKDF 63
            IQYHLL ALN+I++HSSASKVRNKMKE+GA+QLLLPFL+E  T+ R  ALN LY +SK  
Sbjct: 358  IQYHLLQALNSISAHSSASKVRNKMKENGAIQLLLPFLSETNTKTRTGALNLLYTLSKYL 417

Query: 62   AGELTEQLGETYLNIVVKII 3
              E TEQL ET+LNI+V II
Sbjct: 418  PAEFTEQLSETHLNIIVNII 437


>ref|XP_002265222.1| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 886

 Score =  495 bits (1275), Expect = e-138
 Identities = 265/380 (69%), Positives = 314/380 (82%)
 Frame = -3

Query: 1142 VGLKLKCGDDEKFKCTLLGLRHLLTEKMVSNEWVIEEDIIPILVNRLASSKQDNRFNIIV 963
            V L+LK G+DE+FK  L GLR L+ ++MV +EW+ +E ++ IL NRL SSK +NR  II 
Sbjct: 231  VVLQLKYGNDEEFKFALSGLRSLIRDQMVDDEWINDEGVVLILSNRLGSSKPNNRLTIIQ 290

Query: 962  VLRILASENDDNKEKMAAVESLRTLVRSLTRDAEERRETVGLLLALSEIPAVRKRIGRIQ 783
            +LR L  EN  NKEK+A   SL T+V+ LTRD EERRE VGLLL LS++PAV +RIGRIQ
Sbjct: 291  MLRNLV-ENAKNKEKLADPNSLSTIVKYLTRDVEERREAVGLLLDLSDLPAVHRRIGRIQ 349

Query: 782  GCIVMLVALLNGDDRLASKDARMLLRALSSNTQDVLHMAEAGYFKPLVQHLNEGSDMSKI 603
            GCIVMLVA+LNG+D +AS+DA  LL ALSSNTQ+ LHMAEAGYFKPLV +L EGSDMSKI
Sbjct: 350  GCIVMLVAILNGEDSVASRDAGKLLSALSSNTQNALHMAEAGYFKPLVHYLKEGSDMSKI 409

Query: 602  LMATAISRMELIDQTSASLGEEGAIEPLVKLFRFGKLEAKLCALGALRNLSCLAENVHRL 423
            LMATA+SRMEL DQ+  SLG++GAIEPLVK+F  GKLE+KL AL AL+NLS L EN+ RL
Sbjct: 410  LMATALSRMELTDQSRGSLGKDGAIEPLVKMFNAGKLESKLSALSALQNLSMLTENIQRL 469

Query: 422  VKSGVVESLLQLLFSITSVLMTLREPAAAILASIAQSDSILVNQDVAQQMLSLLNLSSPV 243
            + SG+V +LLQLLFS+TSVLMTLREPA+AILA IAQS+SILVNQDVAQQMLSLLNLSSPV
Sbjct: 470  ISSGIVVALLQLLFSVTSVLMTLREPASAILARIAQSESILVNQDVAQQMLSLLNLSSPV 529

Query: 242  IQYHLLCALNNIASHSSASKVRNKMKESGAVQLLLPFLTENKTQIRAIALNFLYNVSKDF 63
            IQYHLL ALN+I++HSSASKVRNKMKE+GA+QLLLPFL+E  T+ R  ALN LY +SK  
Sbjct: 530  IQYHLLQALNSISAHSSASKVRNKMKENGAIQLLLPFLSETNTKTRTGALNLLYTLSKYL 589

Query: 62   AGELTEQLGETYLNIVVKII 3
              E TEQL ET+LNI+V II
Sbjct: 590  PAEFTEQLSETHLNIIVNII 609


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