BLASTX nr result

ID: Coptis23_contig00024641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024641
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515949.1| Stem 28 kDa glycoprotein precursor, putative...   139   2e-31
ref|NP_001148296.1| stem 28 kDa glycoprotein precursor [Zea mays...   130   1e-28
gb|AFW77368.1| stem glycoprotein [Zea mays]                           127   7e-28
ref|XP_002439412.1| hypothetical protein SORBIDRAFT_09g005960 [S...   127   7e-28
ref|XP_003632911.1| PREDICTED: acid phosphatase 1-like [Vitis vi...   127   7e-28

>ref|XP_002515949.1| Stem 28 kDa glycoprotein precursor, putative [Ricinus communis]
           gi|223544854|gb|EEF46369.1| Stem 28 kDa glycoprotein
           precursor, putative [Ricinus communis]
          Length = 258

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/133 (56%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = -3

Query: 387 LLFLAFIVSICCASHHG---GLPLPIHL-RPNFHSDDRLNTGISCDSWRLAVETNNIGYW 220
           LLFLA I+    A+ HG   G+P  IHL RP   +      G+SC SWRL VETNNI  W
Sbjct: 6   LLFLAIIL----ATSHGSEMGVPHQIHLLRPQSGTAGHHVPGVSCLSWRLGVETNNIIGW 61

Query: 219 HGIPVECENYVGNYMLRDLYGEDSKFVANLATLYIESLDLTGDGKDVWVFDIDDTLLSNV 40
             +P ECE YVG+YML   Y +DSK +A+ A LY +SL+L+GDGKD+WVFDID+T LSN+
Sbjct: 62  TTVPAECEGYVGHYMLGHQYRKDSKIIADEAFLYAKSLELSGDGKDIWVFDIDETTLSNL 121

Query: 39  PYYAVTGFGARHY 1
           PYYA  GFGA  Y
Sbjct: 122 PYYAEHGFGAEPY 134


>ref|NP_001148296.1| stem 28 kDa glycoprotein precursor [Zea mays]
           gi|195617212|gb|ACG30436.1| stem 28 kDa glycoprotein
           precursor [Zea mays]
          Length = 272

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/142 (47%), Positives = 85/142 (59%), Gaps = 9/142 (6%)
 Frame = -3

Query: 399 KGLSLLFLAFIVSICCASH-------HGGLPLPIHLRPNFHSDDRLNTG--ISCDSWRLA 247
           K L+ +FLA ++++   +          G+PL   LRP  HS   L     + CDSWR A
Sbjct: 8   KHLAAVFLAILLALAAGATGMRASEIDDGMPLIHMLRPLLHSGGDLGRRGRVPCDSWRFA 67

Query: 246 VETNNIGYWHGIPVECENYVGNYMLRDLYGEDSKFVANLATLYIESLDLTGDGKDVWVFD 67
           VETN +  W  +P  CE YVGNYML   Y  DS+ VAN A  Y E L+LTG GK+VWVFD
Sbjct: 68  VETNTLRDWDTVPARCEKYVGNYMLGGHYRSDSRAVANEAIAYAEGLNLTGQGKEVWVFD 127

Query: 66  IDDTLLSNVPYYAVTGFGARHY 1
           +D+T LSN+PYYA  GFG   Y
Sbjct: 128 VDETTLSNLPYYAKHGFGVEPY 149


>gb|AFW77368.1| stem glycoprotein [Zea mays]
          Length = 272

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/114 (55%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336 GLPLPIHLRPNFHSDDRLNTG--ISCDSWRLAVETNNIGYWHGIPVECENYVGNYMLRDL 163
           G+PL   LRP  HS   L     + CDSWR AVETN +  W  +P  CE YVGNYML   
Sbjct: 36  GMPLIHMLRPLLHSGGDLGRRGRVPCDSWRFAVETNTLRDWDTVPARCEKYVGNYMLGGH 95

Query: 162 YGEDSKFVANLATLYIESLDLTGDGKDVWVFDIDDTLLSNVPYYAVTGFGARHY 1
           Y  DS+ VAN A  Y E L+LTG GK+VWVFD+D+T LSN+PYYA  GFG   Y
Sbjct: 96  YRSDSRAVANEAIAYAEGLNLTGQGKEVWVFDVDETTLSNLPYYAKHGFGVEPY 149


>ref|XP_002439412.1| hypothetical protein SORBIDRAFT_09g005960 [Sorghum bicolor]
           gi|241944697|gb|EES17842.1| hypothetical protein
           SORBIDRAFT_09g005960 [Sorghum bicolor]
          Length = 268

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/114 (53%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = -3

Query: 336 GLPLPIHLRPNFHSDDRLNT--GISCDSWRLAVETNNIGYWHGIPVECENYVGNYMLRDL 163
           G+PL   LRP  HS   L    G+ CDSWR AVET+ +  W  +P  CE YVGNYML   
Sbjct: 32  GMPLIHMLRPLLHSSGHLGRLGGVPCDSWRFAVETDTLRDWETVPARCEKYVGNYMLGGQ 91

Query: 162 YGEDSKFVANLATLYIESLDLTGDGKDVWVFDIDDTLLSNVPYYAVTGFGARHY 1
           Y  DS+ V + A  Y E L L+GDGK+VWVFD+D+T LSN+PYYA  GFG+  Y
Sbjct: 92  YRSDSQAVVDEAVAYAEGLKLSGDGKEVWVFDVDETTLSNLPYYAEHGFGSEPY 145


>ref|XP_003632911.1| PREDICTED: acid phosphatase 1-like [Vitis vinifera]
          Length = 255

 Score =  127 bits (320), Expect = 7e-28
 Identities = 65/110 (59%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = -3

Query: 336 GLPLPIHL-RPNFHSDDRLNTGISCDSWRLAVETNNIGYWHGIPVECENYVGNYMLRDLY 160
           G+   IHL RP   S     +G+SC SWRLAVETNNI  W  +P  CE+YVG+YML   Y
Sbjct: 20  GISHEIHLLRPRLASGVHPASGLSCPSWRLAVETNNIINWETVPQACESYVGHYMLGHQY 79

Query: 159 GEDSKFVANLATLYIESLDLTGDGKDVWVFDIDDTLLSNVPYYAVTGFGA 10
            +DS+ V   A  Y ESL L GDGKDVWVFDID+T LSN+PYYA  GFGA
Sbjct: 80  RQDSRVVVYEAIAYAESLKLGGDGKDVWVFDIDETTLSNLPYYAENGFGA 129


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