BLASTX nr result

ID: Coptis23_contig00024640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024640
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16905.3| unnamed protein product [Vitis vinifera]              131   5e-29
emb|CAN67491.1| hypothetical protein VITISV_035977 [Vitis vinifera]   130   1e-28
ref|XP_002278644.1| PREDICTED: WPP domain-interacting tail-ancho...   129   3e-28
ref|XP_002267767.2| PREDICTED: WPP domain-interacting tail-ancho...   121   5e-26
emb|CBI27417.3| unnamed protein product [Vitis vinifera]              121   5e-26

>emb|CBI16905.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  131 bits (330), Expect = 5e-29
 Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 9/178 (5%)
 Frame = -3

Query: 513 SAANDDIKIGEPDDLSDNICLNEIVS-----LSSNGNARGILTRVELDVAYCSEKLLNLE 349
           +A+ DDI   +P+   +N+ L+E +S     +   GNA  +L RVELD+A  SEKL NL 
Sbjct: 10  TASVDDINTSDPEAEENNMDLHEGISSYGEVMLEVGNATEVLKRVELDLACSSEKLFNLS 69

Query: 348 NLLMQVFSRENEYESLLATENNVILEESVDKGLEFDFLYGILDSELRELDNFMGSMQTEI 169
            L M V +RE+++E+  A+E   +L++SV K LEFD L GILDSE+RE+DNFM ++Q ++
Sbjct: 70  ILTMHVATRESDFEAF-ASEEEHVLDDSVQKALEFDLLSGILDSEVREVDNFMTTLQKDV 128

Query: 168 SDARQKNSFCGNYKEPFNEIEEKLRDSEETLKQLQTQLKEMKMQCA----TLSAFNGQ 7
           +   +  S C N    F E+EEKL DS+  LKQ Q  + E++MQ A    TL  F+G+
Sbjct: 129 AHTHEILSSCENLGGAFMEMEEKLHDSDVLLKQSQDHVSEIRMQSAKFQRTLLCFDGE 186


>emb|CAN67491.1| hypothetical protein VITISV_035977 [Vitis vinifera]
          Length = 737

 Score =  130 bits (327), Expect = 1e-28
 Identities = 78/178 (43%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
 Frame = -3

Query: 513 SAANDDIKIGEPDDLSDNICLNEIVS-----LSSNGNARGILTRVELDVAYCSEKLLNLE 349
           +A+ DDI   +P+   +N+ L+E +S     +   GNA  +L RVELD+A  SEKL NL 
Sbjct: 10  TASVDDINTSDPEAEXNNMDLHEGISSYGEVMLEVGNATEVLKRVELDLACSSEKLFNLS 69

Query: 348 NLLMQVFSRENEYESLLATENNVILEESVDKGLEFDFLYGILDSELRELDNFMGSMQTEI 169
            L M V +RE+++E+  A+E   +L++SV K LEFD L GILDSE+RE+DNFM  +Q ++
Sbjct: 70  ILTMHVATRESDFEAF-ASEEEHVLDDSVQKALEFDLLSGILDSEVREVDNFMTXLQKDV 128

Query: 168 SDARQKNSFCGNYKEPFNEIEEKLRDSEETLKQLQTQLKEMKMQCA----TLSAFNGQ 7
           +   +  S C N    F E+EEKL DS+  LKQ Q  + E++MQ A    TL  F+G+
Sbjct: 129 AHTHEILSSCENLGGAFMEMEEKLHDSDVLLKQSQDHVSEIRMQSAKFQRTLLCFDGE 186


>ref|XP_002278644.1| PREDICTED: WPP domain-interacting tail-anchored protein 1-like
           [Vitis vinifera]
          Length = 707

 Score =  129 bits (323), Expect = 3e-28
 Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 5/166 (3%)
 Frame = -3

Query: 513 SAANDDIKIGEPDDLSDNICLNEIVS-----LSSNGNARGILTRVELDVAYCSEKLLNLE 349
           +A+ DDI   +P+   +N+ L+E +S     +   GNA  +L RVELD+A  SEKL NL 
Sbjct: 10  TASVDDINTSDPEAEENNMDLHEGISSYGEVMLEVGNATEVLKRVELDLACSSEKLFNLS 69

Query: 348 NLLMQVFSRENEYESLLATENNVILEESVDKGLEFDFLYGILDSELRELDNFMGSMQTEI 169
            L M V +RE+++E+  A+E   +L++SV K LEFD L GILDSE+RE+DNFM ++Q ++
Sbjct: 70  ILTMHVATRESDFEAF-ASEEEHVLDDSVQKALEFDLLSGILDSEVREVDNFMTTLQKDV 128

Query: 168 SDARQKNSFCGNYKEPFNEIEEKLRDSEETLKQLQTQLKEMKMQCA 31
           +   +  S C N    F E+EEKL DS+  LKQ Q  + E++MQ A
Sbjct: 129 AHTHEILSSCENLGGAFMEMEEKLHDSDVLLKQSQDHVSEIRMQSA 174


>ref|XP_002267767.2| PREDICTED: WPP domain-interacting tail-anchored protein 2-like
           [Vitis vinifera]
          Length = 629

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/126 (51%), Positives = 91/126 (72%)
 Frame = -3

Query: 408 ILTRVELDVAYCSEKLLNLENLLMQVFSRENEYESLLATENNVILEESVDKGLEFDFLYG 229
           +L  ++LD+AY SEKL+NL  LLMQV++REN +E++ A E + I  +S++K L FD L G
Sbjct: 27  VLLSLDLDLAYSSEKLVNLHVLLMQVWARENVFEAM-AMEKDHISADSIEKALVFDLLSG 85

Query: 228 ILDSELRELDNFMGSMQTEISDARQKNSFCGNYKEPFNEIEEKLRDSEETLKQLQTQLKE 49
           ILDSE+RE++NFM ++Q EI DA +K   C + +E FN +EEKL D EE+LKQ Q Q+ +
Sbjct: 86  ILDSEVREIENFMDTLQAEIVDAHKKIYSCSHLRELFNVMEEKLIDCEESLKQSQEQVLK 145

Query: 48  MKMQCA 31
           M  Q A
Sbjct: 146 MNTQLA 151


>emb|CBI27417.3| unnamed protein product [Vitis vinifera]
          Length = 735

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/126 (51%), Positives = 91/126 (72%)
 Frame = -3

Query: 408 ILTRVELDVAYCSEKLLNLENLLMQVFSRENEYESLLATENNVILEESVDKGLEFDFLYG 229
           +L  ++LD+AY SEKL+NL  LLMQV++REN +E++ A E + I  +S++K L FD L G
Sbjct: 80  VLLSLDLDLAYSSEKLVNLHVLLMQVWARENVFEAM-AMEKDHISADSIEKALVFDLLSG 138

Query: 228 ILDSELRELDNFMGSMQTEISDARQKNSFCGNYKEPFNEIEEKLRDSEETLKQLQTQLKE 49
           ILDSE+RE++NFM ++Q EI DA +K   C + +E FN +EEKL D EE+LKQ Q Q+ +
Sbjct: 139 ILDSEVREIENFMDTLQAEIVDAHKKIYSCSHLRELFNVMEEKLIDCEESLKQSQEQVLK 198

Query: 48  MKMQCA 31
           M  Q A
Sbjct: 199 MNTQLA 204


Top