BLASTX nr result

ID: Coptis23_contig00024631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024631
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU16688.1| unknown [Glycine max]                                   74   1e-11
ref|XP_004138041.1| PREDICTED: uncharacterized protein LOC101212...    62   5e-08
ref|XP_003525413.1| PREDICTED: uncharacterized protein LOC100805...    60   2e-07
ref|XP_002514896.1| conserved hypothetical protein [Ricinus comm...    60   3e-07
gb|AAQ09000.1| hypothetical protein [Phaseolus vulgaris]               59   4e-07

>gb|ACU16688.1| unknown [Glycine max]
          Length = 70

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +2

Query: 224 VNTYGNKKDSNKPKENDTVNYNRRHTCLHVTKLHHPSFPGKLKQ*SWL*QHKQHNCYYHW 403
           ++T  NKKD N+ KE+D V+ +R  T LHV KL+H + P +LKQ +   QHKQH+CY+HW
Sbjct: 1   MHTNSNKKDGNETKEDDCVDQDRNCTGLHVPKLYHSAPPRQLKQKTRAKQHKQHHCYHHW 60

Query: 404 PPICH 418
            PI H
Sbjct: 61  TPIRH 65


>ref|XP_004138041.1| PREDICTED: uncharacterized protein LOC101212373 [Cucumis sativus]
           gi|449520509|ref|XP_004167276.1| PREDICTED:
           uncharacterized LOC101212373 [Cucumis sativus]
          Length = 69

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 36/69 (52%), Positives = 37/69 (53%)
 Frame = -2

Query: 418 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 239
           MADWGPVIIAV                KGRVVEFGNMQTS ASI+VH             
Sbjct: 1   MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60

Query: 238 XXGVHIYTG 212
             GVHIYTG
Sbjct: 61  AIGVHIYTG 69


>ref|XP_003525413.1| PREDICTED: uncharacterized protein LOC100805083 [Glycine max]
          Length = 103

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/70 (47%), Positives = 37/70 (52%)
 Frame = -2

Query: 421 RMADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXX 242
           +MADWGPV+IAV                +GRV EFGNMQTS ASI+VH            
Sbjct: 34  KMADWGPVVIAVVLFVLLSPGLLFQMPARGRVAEFGNMQTSGASILVHAIIYFGLITIFL 93

Query: 241 XXXGVHIYTG 212
              GVHIYTG
Sbjct: 94  IAIGVHIYTG 103


>ref|XP_002514896.1| conserved hypothetical protein [Ricinus communis]
           gi|223545947|gb|EEF47450.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 35/69 (50%), Positives = 37/69 (53%)
 Frame = -2

Query: 418 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 239
           MADWGPV+IAV               GKGRVVEFGNMQTS  SI+VH             
Sbjct: 1   MADWGPVVIAVVLFVLLSPGLLFQLPGKGRVVEFGNMQTSGLSILVHTIIFFALVTIFLI 60

Query: 238 XXGVHIYTG 212
             GVHIYTG
Sbjct: 61  AIGVHIYTG 69


>gb|AAQ09000.1| hypothetical protein [Phaseolus vulgaris]
          Length = 69

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 33/69 (47%), Positives = 36/69 (52%)
 Frame = -2

Query: 418 MADWGPVIIAVXXXXXXXXXXXXXXXGKGRVVEFGNMQTSVASIVVHCXXXXXXXXXXXX 239
           MADWGPVIIAV                +GR+ EFGNMQTS ASI+VH             
Sbjct: 1   MADWGPVIIAVVLFVLLSPGLLFQIPSRGRIAEFGNMQTSGASILVHAVIYFGLITIFLI 60

Query: 238 XXGVHIYTG 212
             GVHIYTG
Sbjct: 61  AIGVHIYTG 69


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