BLASTX nr result

ID: Coptis23_contig00024605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024605
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261...   119   2e-25
emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]   119   2e-25
ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
emb|CBI26259.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm...    99   5e-19

>ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261343 [Vitis vinifera]
          Length = 223

 Score =  119 bits (299), Expect = 2e-25
 Identities = 74/189 (39%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
 Frame = -3

Query: 502 NLHLCFTK----PLTPDSSPPQESQNH------------------MKNFNSLYDHTPEXX 389
           N +LC +K    P T  SSPP +  ++                  +KNFNSLYD T +  
Sbjct: 8   NFNLCLSKLKCFPTTLPSSPPSKHDHNRHPSSSSSSSISSTSSVLIKNFNSLYDLTSDST 67

Query: 388 XXXXXXXXXXXXXXXXXXXXXXXXXXXFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXX 209
                                       AT+  SQRFFFSSPGR                
Sbjct: 68  SKSLTRTTDDFLSTSEDSVDSESPPDF-ATVFASQRFFFSSPGRSNSIFEASESPPESDS 126

Query: 208 XXXXXXXXTLVGGGVPLSTYSPDPYKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLA 29
                    +V GGV + TYSP+PY+DFRRSMQEM E+R+  DV  DWD+LHELLLCYL 
Sbjct: 127 ---------IVNGGVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADWDYLHELLLCYLT 177

Query: 28  LNPKHAHKY 2
           LNPKH HK+
Sbjct: 178 LNPKHTHKF 186


>emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]
          Length = 428

 Score =  119 bits (299), Expect = 2e-25
 Identities = 74/189 (39%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
 Frame = -3

Query: 502 NLHLCFTK----PLTPDSSPPQESQNH------------------MKNFNSLYDHTPEXX 389
           N +LC +K    P T  SSPP +  ++                  +KNFNSLYD T +  
Sbjct: 8   NFNLCLSKLKCFPTTLPSSPPSKHDHNRHPSSSSSSSISSTSSILIKNFNSLYDLTSDST 67

Query: 388 XXXXXXXXXXXXXXXXXXXXXXXXXXXFATILTSQRFFFSSPGRXXXXXXXXXXXXXXXX 209
                                       AT+  SQRFFFSSPGR                
Sbjct: 68  SKSLTRTTDDFLSTSEDSVDSESPPDF-ATVFASQRFFFSSPGRSNSIFEASESPPESDA 126

Query: 208 XXXXXXXXTLVGGGVPLSTYSPDPYKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLA 29
                    +V GGV + TYSP+PY+DFRRSMQEM E+R+  DV  DWD+LHELLLCYL 
Sbjct: 127 ---------IVNGGVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADWDYLHELLLCYLT 177

Query: 28  LNPKHAHKY 2
           LNPKH HK+
Sbjct: 178 LNPKHTHKF 186


>ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/101 (51%), Positives = 59/101 (58%)
 Frame = -3

Query: 304 ATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPDPYKDF 125
           ATIL SQR FFSSPGR                          V GGV +  YSPDPY DF
Sbjct: 92  ATILASQRLFFSSPGRSNSIIESLPEPQTP------------VSGGVAIKKYSPDPYTDF 139

Query: 124 RRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKY 2
           + SMQEM+E+R+  DV   WD+LHELL CYL LNPKH HK+
Sbjct: 140 KHSMQEMIEARELRDVRAKWDYLHELLSCYLKLNPKHTHKF 180


>emb|CBI26259.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/60 (70%), Positives = 50/60 (83%)
 Frame = -3

Query: 181 LVGGGVPLSTYSPDPYKDFRRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKY 2
           +V GGV + TYSP+PY+DFRRSMQEM E+R+  DV  DWD+LHELLLCYL LNPKH HK+
Sbjct: 128 IVNGGVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADWDYLHELLLCYLTLNPKHTHKF 187


>ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis]
           gi|223543765|gb|EEF45293.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/101 (50%), Positives = 58/101 (57%)
 Frame = -3

Query: 304 ATILTSQRFFFSSPGRXXXXXXXXXXXXXXXXXXXXXXXXTLVGGGVPLSTYSPDPYKDF 125
           A I  SQRFFFSSPGR                          + GGV +  YSPDPY DF
Sbjct: 97  AAIFASQRFFFSSPGRSNSIIESPETPSAEPQTP--------LNGGVAVKKYSPDPYADF 148

Query: 124 RRSMQEMVESRKCSDVTNDWDFLHELLLCYLALNPKHAHKY 2
           R+SM EM+E+RK  DV  DWD+LHELL CYL LNPK  HK+
Sbjct: 149 RQSMLEMIEARKPRDVKADWDYLHELLSCYLNLNPKQTHKF 189


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