BLASTX nr result

ID: Coptis23_contig00024595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024595
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]   286   9e-75
emb|CBI27477.3| unnamed protein product [Vitis vinifera]              285   2e-74
ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat rece...   285   2e-74
ref|XP_002518813.1| receptor-kinase, putative [Ricinus communis]...   273   6e-71
ref|XP_002311575.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68

>emb|CAN80935.1| hypothetical protein VITISV_005661 [Vitis vinifera]
          Length = 695

 Score =  286 bits (731), Expect = 9e-75
 Identities = 145/211 (68%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
 Frame = -2

Query: 634 GDREALLSLKSTIDPLNTLEWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNLNGTLQEVT 455
           GD E LL+LKS IDP N+L+W G  SDFCKW GV+EC RGRVTKLVLEHLNLNGTL E +
Sbjct: 23  GDGETLLALKSWIDPSNSLQWRG--SDFCKWQGVKECMRGRVTKLVLEHLNLNGTLDEKS 80

Query: 454 LNQLDQLRVLSFKGNSITGQIPNLSGLPNLKSLFLNGNCFSGQFPTSITSLHRLKVVVMS 275
           L QLDQLRVLSFK NS++GQIP+LSGL NLKSLFLN N FSG FP+S++ LHRLKV++++
Sbjct: 81  LAQLDQLRVLSFKENSLSGQIPDLSGLINLKSLFLNNNNFSGDFPSSLSGLHRLKVIILA 140

Query: 274 GNSLSGELPMSXXXXXXXXXXXLQDNKLTGKVPPFNQTSLRFFNVSNNQLSGEIPLTAAL 95
           GN +SG++P S           LQDN+LTG++PP NQTSLRFFNVSNNQLSGEIPLT AL
Sbjct: 141 GNQISGQIPASLLKLQRLYILYLQDNRLTGEIPPLNQTSLRFFNVSNNQLSGEIPLTPAL 200

Query: 94  VRFNFSSFSNDLNLCGVQIQQPCRN--ALSP 8
           VRFN SSFSN+L LCG Q+  PC    A+SP
Sbjct: 201 VRFNQSSFSNNLELCGEQVNSPCPRSPAISP 231


>emb|CBI27477.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  285 bits (728), Expect = 2e-74
 Identities = 144/211 (68%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
 Frame = -2

Query: 634 GDREALLSLKSTIDPLNTLEWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNLNGTLQEVT 455
           GD E LL+LKS IDP N+L+W G  SDFCKW GV+EC RGRVTKLVLEHLNLNGTL E +
Sbjct: 23  GDGETLLALKSWIDPSNSLQWRG--SDFCKWQGVKECMRGRVTKLVLEHLNLNGTLDEKS 80

Query: 454 LNQLDQLRVLSFKGNSITGQIPNLSGLPNLKSLFLNGNCFSGQFPTSITSLHRLKVVVMS 275
           L QLDQLRVLSFK NS++GQIP+LSGL NLKSLFLN N FSG FP+S++ LHRLKV++++
Sbjct: 81  LAQLDQLRVLSFKENSLSGQIPDLSGLINLKSLFLNNNNFSGDFPSSLSGLHRLKVIILA 140

Query: 274 GNSLSGELPMSXXXXXXXXXXXLQDNKLTGKVPPFNQTSLRFFNVSNNQLSGEIPLTAAL 95
           GN +SG++P S           LQDN+LTG++PP NQTSLRFFNVSNNQLSGEIPLT A+
Sbjct: 141 GNQISGQIPASLLKLQRLYILYLQDNRLTGEIPPLNQTSLRFFNVSNNQLSGEIPLTPAV 200

Query: 94  VRFNFSSFSNDLNLCGVQIQQPCRN--ALSP 8
           VRFN SSFSN+L LCG Q+  PC    A+SP
Sbjct: 201 VRFNQSSFSNNLELCGEQVNSPCPRSPAISP 231


>ref|XP_003631342.1| PREDICTED: inactive leucine-rich repeat receptor-like
           serine/threonine-protein kinase At1g60630-like [Vitis
           vinifera]
          Length = 662

 Score =  285 bits (728), Expect = 2e-74
 Identities = 144/211 (68%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
 Frame = -2

Query: 634 GDREALLSLKSTIDPLNTLEWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNLNGTLQEVT 455
           GD E LL+LKS IDP N+L+W G  SDFCKW GV+EC RGRVTKLVLEHLNLNGTL E +
Sbjct: 32  GDGETLLALKSWIDPSNSLQWRG--SDFCKWQGVKECMRGRVTKLVLEHLNLNGTLDEKS 89

Query: 454 LNQLDQLRVLSFKGNSITGQIPNLSGLPNLKSLFLNGNCFSGQFPTSITSLHRLKVVVMS 275
           L QLDQLRVLSFK NS++GQIP+LSGL NLKSLFLN N FSG FP+S++ LHRLKV++++
Sbjct: 90  LAQLDQLRVLSFKENSLSGQIPDLSGLINLKSLFLNNNNFSGDFPSSLSGLHRLKVIILA 149

Query: 274 GNSLSGELPMSXXXXXXXXXXXLQDNKLTGKVPPFNQTSLRFFNVSNNQLSGEIPLTAAL 95
           GN +SG++P S           LQDN+LTG++PP NQTSLRFFNVSNNQLSGEIPLT A+
Sbjct: 150 GNQISGQIPASLLKLQRLYILYLQDNRLTGEIPPLNQTSLRFFNVSNNQLSGEIPLTPAV 209

Query: 94  VRFNFSSFSNDLNLCGVQIQQPCRN--ALSP 8
           VRFN SSFSN+L LCG Q+  PC    A+SP
Sbjct: 210 VRFNQSSFSNNLELCGEQVNSPCPRSPAISP 240


>ref|XP_002518813.1| receptor-kinase, putative [Ricinus communis]
           gi|223542194|gb|EEF43738.1| receptor-kinase, putative
           [Ricinus communis]
          Length = 663

 Score =  273 bits (698), Expect = 6e-71
 Identities = 139/204 (68%), Positives = 160/204 (78%)
 Frame = -2

Query: 631 DREALLSLKSTIDPLNTLEWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNLNGTLQEVTL 452
           D EALL+LKS+IDP N+L W    SD CKW G++EC  GRVTKLVLE+LNL GTL   TL
Sbjct: 26  DAEALLTLKSSIDPSNSLPWP-QGSDACKWRGIKECMNGRVTKLVLEYLNLRGTLDAKTL 84

Query: 451 NQLDQLRVLSFKGNSITGQIPNLSGLPNLKSLFLNGNCFSGQFPTSITSLHRLKVVVMSG 272
           NQLDQLRVLSFKGNSI+GQIP+LSGL NLKSLFLN N FSG FP SITSLHRLKVVV++ 
Sbjct: 85  NQLDQLRVLSFKGNSISGQIPSLSGLVNLKSLFLNSNNFSGNFPDSITSLHRLKVVVLAD 144

Query: 271 NSLSGELPMSXXXXXXXXXXXLQDNKLTGKVPPFNQTSLRFFNVSNNQLSGEIPLTAALV 92
           N +SG LP+S           LQDN+ TG +PP NQTSLRFFNVSNN+LSGEIP+T AL+
Sbjct: 145 NQISGPLPVSLLKLARLYVLNLQDNRFTGPIPPLNQTSLRFFNVSNNELSGEIPVTPALI 204

Query: 91  RFNFSSFSNDLNLCGVQIQQPCRN 20
           RFN SSFS ++++CG QI  PC N
Sbjct: 205 RFNTSSFSGNVDICGEQIGNPCSN 228


>ref|XP_002311575.1| predicted protein [Populus trichocarpa] gi|222851395|gb|EEE88942.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  265 bits (676), Expect = 2e-68
 Identities = 133/205 (64%), Positives = 156/205 (76%)
 Frame = -2

Query: 634 GDREALLSLKSTIDPLNTLEWGGNNSDFCKWDGVRECNRGRVTKLVLEHLNLNGTLQEVT 455
           GD EALL+LKS IDPLN+L W     + CKW GV+EC  GRVTKLV+E+ NL+GTL    
Sbjct: 29  GDAEALLTLKSAIDPLNSLSWQ-QGINVCKWQGVKECKNGRVTKLVVEYQNLSGTLDAKI 87

Query: 454 LNQLDQLRVLSFKGNSITGQIPNLSGLPNLKSLFLNGNCFSGQFPTSITSLHRLKVVVMS 275
           LNQLDQLRVLSFKGNS++GQIP+LSGL NLKSLFL  N FS  FP SIT LHRLKV+V++
Sbjct: 88  LNQLDQLRVLSFKGNSLSGQIPSLSGLVNLKSLFLQTNNFSSDFPDSITGLHRLKVIVLA 147

Query: 274 GNSLSGELPMSXXXXXXXXXXXLQDNKLTGKVPPFNQTSLRFFNVSNNQLSGEIPLTAAL 95
            N +SG +P S           L+DNK TG +PP NQTSLRFFNVSNNQLSG+IP+T++L
Sbjct: 148 QNQISGPIPASLLKLSRLYVLYLEDNKFTGAIPPLNQTSLRFFNVSNNQLSGQIPVTSSL 207

Query: 94  VRFNFSSFSNDLNLCGVQIQQPCRN 20
           +RFN SSF  +LNLCG QIQ PC N
Sbjct: 208 IRFNTSSFIGNLNLCGEQIQNPCNN 232


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