BLASTX nr result

ID: Coptis23_contig00024589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024589
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27173.3| unnamed protein product [Vitis vinifera]              129   6e-28
ref|XP_002277133.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 ...   129   6e-28
emb|CAN72995.1| hypothetical protein VITISV_030744 [Vitis vinifera]   124   2e-26
emb|CBI27174.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002321809.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>emb|CBI27173.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  129 bits (323), Expect = 6e-28
 Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 5/175 (2%)
 Frame = +2

Query: 98  ASTKPHYEG-DPNEVEQVGP--IIKIKPRGLHIVWGNEKRYWRIPTKNDNGSAELIQVCW 268
           +ST PH++  DP +++      +    PR L+++WG   RYW++P KN    AEL+QVCW
Sbjct: 2   SSTAPHHDAEDPPQLQSKDGKLMATFNPRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCW 61

Query: 269 LEVTALVPLSMLQVGKKYNVSFDVSLKADAFGWNKQTPLYLVAXXXXXXXXXXXXXXXAS 448
           LEV+  VP+    +G K+ ++F VS K+DAFGWN   P+Y++A                +
Sbjct: 62  LEVSGSVPIRSASIGTKFRITFQVSFKSDAFGWN-NCPVYVMAKFGKKGKYAWTKISLRT 120

Query: 449 SPGETINISLGEPLEI-NEDEKNSGGMLYFGLYEL-GGRWKGGLLMKEARVEQID 607
              +  NI   E LEI  +D  N    +YFGLYE+  G+WKGGL +  A VEQ++
Sbjct: 121 DYSQPTNILPPEGLEIVTKDAPNVNDTIYFGLYEVWSGKWKGGLELHNATVEQMN 175


>ref|XP_002277133.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Vitis vinifera]
           gi|297737974|emb|CBI27175.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  129 bits (323), Expect = 6e-28
 Identities = 69/177 (38%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
 Frame = +2

Query: 98  ASTKPHYEGD--PNEVEQVGPIIK-IKPRGLHIVWGNEKRYWRIPTKNDNGSAELIQVCW 268
           +ST PH++ +  P    + G ++    PR L+++WG + RYW++P KN  G AEL+QVCW
Sbjct: 2   SSTTPHHDAEEPPQLQSKDGKLMATFNPRQLNVIWGRDPRYWKMPEKNSGGPAELLQVCW 61

Query: 269 LEVTALVPLSMLQVGKKYNVSFDVSLKADAFGWNKQTPLYLVAXXXXXXXXXXXXXXXAS 448
           LEV+  VP+    +G K+ ++F VS K+DAFGWN   P+Y++A                +
Sbjct: 62  LEVSGSVPIRSAPIGTKFKITFQVSFKSDAFGWN-NCPVYVMAKFGKKGKYTWTKISLRT 120

Query: 449 SPGETINISLGEPLEINEDE---KNSGGMLYFGLYEL-GGRWKGGLLMKEARVEQID 607
              +  NI   + LEI   E    N    +YFGLYE+  G+WKGGL +  A VEQI+
Sbjct: 121 DNSQPTNILPPDGLEIVTKEATTANVNDTIYFGLYEVWSGKWKGGLELHNAMVEQIN 177


>emb|CAN72995.1| hypothetical protein VITISV_030744 [Vitis vinifera]
          Length = 366

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
 Frame = +2

Query: 170 PRGLHIVWGNEKRYWRIPTKNDNGSAELIQVCWLEVTALVPLSMLQVGKKYNVSFDVSLK 349
           PR L+++WG   RYW++P KN    AEL+QVCWLEV+  VP+    +G K+ ++F VS K
Sbjct: 218 PRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCWLEVSGSVPIRSASIGTKFRITFQVSFK 277

Query: 350 ADAFGWNKQTPLYLVAXXXXXXXXXXXXXXXASSPGETINISLGEPLEI-NEDEKNSGGM 526
           +DAFGWN   P+Y++A                +   +  NI   E LEI  +D  N    
Sbjct: 278 SDAFGWN-NCPVYVMAKFGKKGKYAWTKISLRTDYSQXTNILPPEGLEIVTKDAPNVNDT 336

Query: 527 LYFGLYEL-GGRWKGGLLMKEARVEQID 607
           +YFGLYE+  G+WKGGL +  A VEQ++
Sbjct: 337 IYFGLYEVWSGKWKGGLELHNATVEQMN 364


>emb|CBI27174.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  120 bits (302), Expect = 2e-25
 Identities = 61/147 (41%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
 Frame = +2

Query: 170 PRGLHIVWGNEKRYWRIPTKNDNGSAELIQVCWLEVTALVPLSMLQVGKKYNVSFDVSLK 349
           PR L++ WG + RYW++P K  N  AEL++VCWLEV+  VP+  +  G KY ++F +SLK
Sbjct: 21  PRQLNVSWGRDSRYWKMPGKGSNRPAELLRVCWLEVSGSVPIGSVPPGTKYRITFQISLK 80

Query: 350 ADAFGWNKQTPLYLVAXXXXXXXXXXXXXXXASSPGETINISLGEPLEINEDEKNSGGML 529
           +DAFGWN   P+Y++A                +   E  +I   E LEI  ++ N    +
Sbjct: 81  SDAFGWN-DCPVYVMAKFGKEGKNSWKKISLQAHYSEPTSIPSTEGLEIETEDAND--TI 137

Query: 530 YFGLYEL-GGRWKGGLLMKEARVEQID 607
           YFGLY++  G WKGGL +  A VEQI+
Sbjct: 138 YFGLYDIWTGHWKGGLQLHNATVEQIN 164


>ref|XP_002321809.1| predicted protein [Populus trichocarpa] gi|222868805|gb|EEF05936.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  117 bits (294), Expect = 1e-24
 Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
 Frame = +2

Query: 95  SASTKPHYEGDPNEVEQVGPIIK--IKPRGLHIVWGNEKRYWRIP--TKNDNGSAELIQV 262
           S+S KPHYE D N+V+  G   +   KPRG  I+WGN++RYW +P  + +D   AEL+QV
Sbjct: 2   SSSNKPHYEADTNKVQYDGEKNRWTFKPRGFSIIWGNDRRYWNLPDQSSSDETPAELVQV 61

Query: 263 CWLEVTALVPLSMLQVGKKYNVSFDVSLKADAFGWNKQTPLYLVAXXXXXXXXXXXXXXX 442
           CWLE+T       L+ G KY + F+VS+K DAFGWN   P++++A               
Sbjct: 62  CWLELTGTTK-DPLKEG-KYKIKFEVSMKKDAFGWN-GCPVFMMAKLGKKGRYRWSKVDL 118

Query: 443 ASSPGETINISLGEPLEINEDEKNSGGMLYFGLYEL-GGRWKGGLLMKEARVEQI 604
             S   T   S+     I+  +      LYFGLYE+  G+WKGGL + +A VE++
Sbjct: 119 --SDVSTDKKSVTSDFVIDVSKGTDDNKLYFGLYEVWTGKWKGGLQIHQAIVEKV 171


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