BLASTX nr result

ID: Coptis23_contig00024581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024581
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    82   4e-14
emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]    82   4e-14
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    80   1e-13
ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    80   1e-13
emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]    80   1e-13

>ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 783

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
 Frame = -1

Query: 306 NEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQ-NDYRAKN---VREHQETRTG 142
           N +AR+VGF  R  +S + R DG +  R FVC KEGFR  N+ R K+    R    TR G
Sbjct: 78  NSYARRVGFSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEKRTKDREIKRPRTITRVG 137

Query: 141 CKARMMIK-QNEDEWVASSITFEHNHLLLTPRKAPMLRSHRSM 16
           CKA + +K Q+  +WV S  T EHNH L+ P K   LRSHR +
Sbjct: 138 CKASLSVKIQDSGKWVVSGFTKEHNHELVPPDKVHCLRSHRQI 180


>emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]
          Length = 841

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
 Frame = -1

Query: 306 NEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQ-NDYRAKN---VREHQETRTG 142
           N +AR+VGF  R  +S + R DG +  R FVC KEGFR  N+ R K+    R    TR G
Sbjct: 78  NSYARRVGFSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEKRTKDREIKRPRTITRVG 137

Query: 141 CKARMMIK-QNEDEWVASSITFEHNHLLLTPRKAPMLRSHRSM 16
           CKA + +K Q+  +WV S  T EHNH L+ P K   LRSHR +
Sbjct: 138 CKASLSVKIQDSGKWVVSGFTKEHNHELVPPDKVHCLRSHRQI 180


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/110 (44%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
 Frame = -1

Query: 306 NEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQN------DYRAKNVREHQETR 148
           N +AR+VGF  R   S + R DG +  R FVC KEGFR +      D R K  R   ETR
Sbjct: 83  NSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKEKPGRDGRVK--RPRAETR 140

Query: 147 TGCKARMMIK-QNEDEWVASSITFEHNHLLLTPRKAPMLRSHRSMKDVHK 1
            GCKA +++K Q+   WV S    EHNH L+ P K   LRSHR +    K
Sbjct: 141 VGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLRSHRHVSGAAK 190


>ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 790

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/103 (47%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
 Frame = -1

Query: 306 NEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQN------DYRAKNVREHQETR 148
           N +AR+VGF  R   S + R DG++  R FVC KEGFR        D R K  R   ETR
Sbjct: 86  NSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEREKHLVDGRVK--RPRAETR 143

Query: 147 TGCKARMMIK-QNEDEWVASSITFEHNHLLLTPRKAPMLRSHR 22
            GCKA +++K Q+   WV SS   EHNH L+ P K   LRSHR
Sbjct: 144 VGCKAMLVVKIQDSGRWVVSSFLKEHNHELVPPDKVHCLRSHR 186


>emb|CAN71534.1| hypothetical protein VITISV_018182 [Vitis vinifera]
          Length = 737

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/110 (44%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
 Frame = -1

Query: 306 NEFARKVGFGIRKGNSYK-RPDGTVRSRVFVCFKEGFRQN------DYRAKNVREHQETR 148
           N +AR+VGF  R   S + R DG +  R FVC KEGFR +      D R K  R   ETR
Sbjct: 83  NSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKEKPGRDGRVK--RPRAETR 140

Query: 147 TGCKARMMIK-QNEDEWVASSITFEHNHLLLTPRKAPMLRSHRSMKDVHK 1
            GCKA +++K Q+   WV S    EHNH L+ P K   LRSHR +    K
Sbjct: 141 VGCKAMLVVKIQDSSRWVVSGFVKEHNHELVPPDKVHCLRSHRHVSGAAK 190


Top