BLASTX nr result

ID: Coptis23_contig00024579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024579
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20805.3| unnamed protein product [Vitis vinifera]              284   3e-74
ref|XP_002332104.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71
ref|XP_002330778.1| predicted protein [Populus trichocarpa] gi|2...   271   2e-70
ref|XP_002527999.1| leucine-rich repeat transmembrane protein ki...   270   4e-70
ref|XP_004166390.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   251   1e-64

>emb|CBI20805.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  284 bits (726), Expect = 3e-74
 Identities = 141/223 (63%), Positives = 169/223 (75%), Gaps = 2/223 (0%)
 Frame = -2

Query: 927  RTPDSPALDWPTRLNILKGIAKGLTYLYNELASISVAHGHLKSSNVLLNASFEPLLSDYC 748
            R P  P LDWP RL I++ +A  L YLY EL+ +++ HGHLKSSNVLL+  FEP+LSDY 
Sbjct: 380  RAPGQPGLDWPIRLKIIQKVAHALAYLYKELSDLTLPHGHLKSSNVLLDDKFEPVLSDYA 439

Query: 747  LIPVVNRDHAVELMVAYKSPEYAQYGRLTRKTDAWSLGILILEMITGKFPENYLTQSSKG 568
            L+P +NR+HA ++MVAYKSPE+ QY R TRKTD WSLGILILEM+TGKFP NYL Q    
Sbjct: 440  LVPAINREHAQQIMVAYKSPEFMQYDRTTRKTDVWSLGILILEMLTGKFPANYLKQGK-- 497

Query: 567  GSNADLAKWVNSVVREEWTGEVFDKDMKGTKNGEGEMLKLLKIGMECCENDVDSRLDLNE 388
            G+N+DL  WVNSVVREEWTGEVFDKDMKGT+NGEGEMLKLLKIGM CCE +++ R DL E
Sbjct: 498  GANSDLLSWVNSVVREEWTGEVFDKDMKGTRNGEGEMLKLLKIGMSCCEWNMEKRWDLKE 557

Query: 387  AXXXXXXXXXXXXXXXDYSSFASEGDY--SRAMTEEEFSFSMN 265
            A               + SS+ASEGD   SRAMT+++FSFS+N
Sbjct: 558  AVKRIEELKERDSDEDN-SSYASEGDIYSSRAMTDDDFSFSVN 599


>ref|XP_002332104.1| predicted protein [Populus trichocarpa] gi|222874924|gb|EEF12055.1|
            predicted protein [Populus trichocarpa]
          Length = 639

 Score =  275 bits (703), Expect = 1e-71
 Identities = 141/226 (62%), Positives = 172/226 (76%), Gaps = 3/226 (1%)
 Frame = -2

Query: 933  GNRTPDSPALDWPTRLNILKGIAKGLTYLYNELASISVAHGHLKSSNVLLNASFEPLLSD 754
            G R+P  P +DWPTRL I+KG+AKGL YLY E  ++++ HGHLKSSNVLL+ +FEPLL+D
Sbjct: 415  GKRSPGKPWIDWPTRLRIIKGVAKGLAYLYKEFPTLALPHGHLKSSNVLLDDTFEPLLTD 474

Query: 753  YCLIPVVNRDHAVELMVAYKSPEYAQYGRLTRKTDAWSLGILILEMITGKFPENYLTQSS 574
            Y L+PVVN+DH+ ++MVAYKSPE +Q  R  RKTD WSLGILILE++TGKFPENYLTQ  
Sbjct: 475  YALVPVVNKDHSQQVMVAYKSPECSQSDRPNRKTDVWSLGILILEILTGKFPENYLTQGK 534

Query: 573  KGGSNADLAKWVNSVVREEWTGEVFDKDMKGTKNGEGEMLKLLKIGMECCENDVDSRLDL 394
              G +ADLA WVNSVVREEWTGEVFD DM  TKN EGEMLKLLKIGM CCE +++ R DL
Sbjct: 535  --GGDADLATWVNSVVREEWTGEVFDMDMMRTKNCEGEMLKLLKIGMCCCEWNLERRWDL 592

Query: 393  NEAXXXXXXXXXXXXXXXDYS-SFASEGDY--SRAMTEEEFSFSMN 265
              A               D+S S+ASEG+   SRA+T+++FSFS+N
Sbjct: 593  KVAVAKIEELKERDNDNDDFSNSYASEGEVYSSRAVTDDDFSFSVN 638


>ref|XP_002330778.1| predicted protein [Populus trichocarpa] gi|222872580|gb|EEF09711.1|
            predicted protein [Populus trichocarpa]
          Length = 622

 Score =  271 bits (693), Expect = 2e-70
 Identities = 139/222 (62%), Positives = 167/222 (75%), Gaps = 1/222 (0%)
 Frame = -2

Query: 927  RTPDSPALDWPTRLNILKGIAKGLTYLYNELASISVAHGHLKSSNVLLNASFEPLLSDYC 748
            R P  P LDWPTRL I+KG+A+GL YLY E  ++++ HGHLKSSNVLL+ +FEPLL+DY 
Sbjct: 402  RAPGKPWLDWPTRLKIVKGVARGLVYLYKEFPTLALPHGHLKSSNVLLDDTFEPLLTDYA 461

Query: 747  LIPVVNRDHAVELMVAYKSPEYAQYGRLTRKTDAWSLGILILEMITGKFPENYLTQSSKG 568
            L+P+VNRDHA ++MVAYKSPE+    R TRKTD WSLGILILE++TGKFPENYL Q   G
Sbjct: 462  LVPLVNRDHAQQVMVAYKSPEFTHSDRTTRKTDVWSLGILILEILTGKFPENYLMQGRGG 521

Query: 567  GSNADLAKWVNSVVREEWTGEVFDKDMKGTKNGEGEMLKLLKIGMECCENDVDSRLDLNE 388
            G  ADLA WVNSVVREEWTGEVFD D+  TKN E EMLKLLK GM CCE ++++R DL E
Sbjct: 522  G--ADLATWVNSVVREEWTGEVFDMDIMRTKNCEKEMLKLLKTGMCCCEWNMENRWDLKE 579

Query: 387  AXXXXXXXXXXXXXXXDYS-SFASEGDYSRAMTEEEFSFSMN 265
            A               D+S S+ASE   SRAMT+++FSFS+N
Sbjct: 580  AVAKIEDLKERDNDNDDFSNSYASEVYSSRAMTDDDFSFSVN 621


>ref|XP_002527999.1| leucine-rich repeat transmembrane protein kinase, putative [Ricinus
            communis] gi|223532625|gb|EEF34411.1| leucine-rich repeat
            transmembrane protein kinase, putative [Ricinus communis]
          Length = 629

 Score =  270 bits (690), Expect = 4e-70
 Identities = 137/226 (60%), Positives = 165/226 (73%), Gaps = 2/226 (0%)
 Frame = -2

Query: 933  GNRTPDSPALDWPTRLNILKGIAKGLTYLYNELASISVAHGHLKSSNVLLNASFEPLLSD 754
            G  +     LDWPTRL I+KG+A+GL YL+ EL S+++ HGHLKSSNVL++ +FEPLL+D
Sbjct: 407  GKHSSGGKKLDWPTRLKIIKGVARGLAYLHKELPSLTLPHGHLKSSNVLVDHTFEPLLTD 466

Query: 753  YCLIPVVNRDHAVELMVAYKSPEYAQYGRLTRKTDAWSLGILILEMITGKFPENYLTQSS 574
            Y L P+VN+ HA + M AYKSPE+ QY R  RKTD WSLGILILEM+TGKFP NY  Q  
Sbjct: 467  YALAPLVNKGHAQQHMAAYKSPEFTQYARTIRKTDVWSLGILILEMLTGKFPANYERQ-- 524

Query: 573  KGGSNADLAKWVNSVVREEWTGEVFDKDMKGTKNGEGEMLKLLKIGMECCENDVDSRLDL 394
             G S  DLA+WVNSVVREEWTGEVFD +M GTKNGEGEMLKLLKIGM CCE  V+ R DL
Sbjct: 525  -GSSKGDLARWVNSVVREEWTGEVFDVEMSGTKNGEGEMLKLLKIGMCCCEWKVERRWDL 583

Query: 393  NEAXXXXXXXXXXXXXXXDYSSFASEGDY--SRAMTEEEFSFSMNS 262
             +A               ++SS ASE D   SRAMT+++FSFS+N+
Sbjct: 584  RKAVDRIEELKERERECDEFSSNASEADIYSSRAMTDDDFSFSINA 629


>ref|XP_004166390.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
            serine/threonine-protein kinase RLK-like [Cucumis
            sativus]
          Length = 655

 Score =  251 bits (642), Expect = 1e-64
 Identities = 126/224 (56%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
 Frame = -2

Query: 933  GNRTPDSPALDWPTRLNILKGIAKGLTYLYNELASISVAHGHLKSSNVLLNASFEPLLSD 754
            G++    PALDWP RL I+KG+ KGL YLY+EL S+   HGHLKSSNVL+ A++EPLLSD
Sbjct: 434  GHKAVGQPALDWPARLKIVKGVGKGLRYLYSELPSLITPHGHLKSSNVLIKANYEPLLSD 493

Query: 753  YCLIPVVNRDHAVELMVAYKSPEYAQYGRLTRKTDAWSLGILILEMITGKFPENYLTQSS 574
            Y LIPVVN++HA ELMVAYKSPEY+Q GR+T+KTD WS G+LILE+++G+FP N+L Q +
Sbjct: 494  YGLIPVVNQEHAHELMVAYKSPEYSQQGRITKKTDVWSFGLLILEILSGQFPANFLHQ-N 552

Query: 573  KGGSNADLAKWVNSVVREEWTGEVFDKDMKGTKNGEGEMLKLLKIGMECCENDVDSRLDL 394
            K G   DLA WV S+  +EW   VFDK+M   K+ EGEM+KLL+I M CCE+D + RLDL
Sbjct: 553  KSGEEEDLASWVKSIPEKEWNTRVFDKEMGPNKSSEGEMMKLLRIAMACCESDFEKRLDL 612

Query: 393  NEAXXXXXXXXXXXXXXXDYSSFASEGDY--SRAMTEEEFSFSM 268
             EA                YSS+ASE D   SR ++ +E +F+M
Sbjct: 613  REAVEKIDEVKXKDGDEDFYSSYASEADIRSSRGLS-DELNFTM 655


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