BLASTX nr result

ID: Coptis23_contig00024572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024572
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39667.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_002279795.1| PREDICTED: isopenicillin N epimerase-like is...   232   3e-59
ref|XP_003521646.1| PREDICTED: isopenicillin N epimerase-like is...   230   1e-58
ref|XP_003554598.1| PREDICTED: isopenicillin N epimerase-like is...   228   4e-58
ref|XP_002512578.1| cysteine desulfurylase, putative [Ricinus co...   228   5e-58

>emb|CBI39667.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  232 bits (592), Expect = 3e-59
 Identities = 111/183 (60%), Positives = 140/183 (76%), Gaps = 5/183 (2%)
 Frame = +3

Query: 33  SMEKHSEQQLVQE-----EFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDF 197
           ++ K S+  L+ E     EFSHHD +IARINNGSFGSCPAS+ +AQH WQL FL+QPD F
Sbjct: 82  NISKKSKPMLISESDLRFEFSHHDPSIARINNGSFGSCPASVTAAQHHWQLLFLRQPDHF 141

Query: 198 YFNHLQPGLLQSRTAIKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTV 377
           YFN LQP +L+SRT IK+L+NA  ++E++++DN TTAAAIVLQ I+W F +G++ RGD V
Sbjct: 142 YFNRLQPAILRSRTLIKDLVNADHVDEISLVDNATTAAAIVLQQIAWAFTEGRFQRGDAV 201

Query: 378 IMLRYTYGAVKKLIHAYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVIL 557
           +ML Y YGAVKK IHAY+ R GG VIE  +PFPV SNE+IV  FR+AL + K N  +V L
Sbjct: 202 VMLHYAYGAVKKSIHAYVCRAGGQVIEVPLPFPVNSNEEIVDEFRRALMRGKANSGRVRL 261

Query: 558 AVI 566
           AVI
Sbjct: 262 AVI 264


>ref|XP_002279795.1| PREDICTED: isopenicillin N epimerase-like isoform 1 [Vitis
           vinifera] gi|359487585|ref|XP_003633615.1| PREDICTED:
           isopenicillin N epimerase-like isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  232 bits (592), Expect = 3e-59
 Identities = 111/183 (60%), Positives = 140/183 (76%), Gaps = 5/183 (2%)
 Frame = +3

Query: 33  SMEKHSEQQLVQE-----EFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDF 197
           ++ K S+  L+ E     EFSHHD +IARINNGSFGSCPAS+ +AQH WQL FL+QPD F
Sbjct: 18  NISKKSKPMLISESDLRFEFSHHDPSIARINNGSFGSCPASVTAAQHHWQLLFLRQPDHF 77

Query: 198 YFNHLQPGLLQSRTAIKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTV 377
           YFN LQP +L+SRT IK+L+NA  ++E++++DN TTAAAIVLQ I+W F +G++ RGD V
Sbjct: 78  YFNRLQPAILRSRTLIKDLVNADHVDEISLVDNATTAAAIVLQQIAWAFTEGRFQRGDAV 137

Query: 378 IMLRYTYGAVKKLIHAYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVIL 557
           +ML Y YGAVKK IHAY+ R GG VIE  +PFPV SNE+IV  FR+AL + K N  +V L
Sbjct: 138 VMLHYAYGAVKKSIHAYVCRAGGQVIEVPLPFPVNSNEEIVDEFRRALMRGKANSGRVRL 197

Query: 558 AVI 566
           AVI
Sbjct: 198 AVI 200


>ref|XP_003521646.1| PREDICTED: isopenicillin N epimerase-like isoform 1 [Glycine max]
           gi|356505739|ref|XP_003521647.1| PREDICTED:
           isopenicillin N epimerase-like isoform 2 [Glycine max]
          Length = 451

 Score =  230 bits (586), Expect = 1e-58
 Identities = 104/168 (61%), Positives = 135/168 (80%)
 Frame = +3

Query: 63  VQEEFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDFYFNHLQPGLLQSRTA 242
           ++ EF HHD  +ARINNGSFG CPASI++AQ +WQL++L+QPD FYFN LQ G+LQSRT 
Sbjct: 33  IESEFGHHDAAVARINNGSFGCCPASILAAQRRWQLQYLRQPDHFYFNDLQSGILQSRTL 92

Query: 243 IKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTVIMLRYTYGAVKKLIH 422
           IK+L+NA  + E++I+DN TTAAAIVLQH +W F +GK+ +GD V+ML Y YGAVKK + 
Sbjct: 93  IKDLVNADHVNEISIVDNATTAAAIVLQHTAWNFREGKFQKGDVVLMLHYAYGAVKKSME 152

Query: 423 AYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVILAVI 566
           AY++R GGNV+E  +PFPV SN++IV  FR+AL + K NGN+V LAVI
Sbjct: 153 AYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGKSNGNRVRLAVI 200


>ref|XP_003554598.1| PREDICTED: isopenicillin N epimerase-like isoform 1 [Glycine max]
           gi|356572892|ref|XP_003554599.1| PREDICTED:
           isopenicillin N epimerase-like isoform 2 [Glycine max]
          Length = 453

 Score =  228 bits (582), Expect = 4e-58
 Identities = 103/168 (61%), Positives = 136/168 (80%)
 Frame = +3

Query: 63  VQEEFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDFYFNHLQPGLLQSRTA 242
           ++ EF HHD ++ARINNGSFG CPASI+SAQ +WQL++L+QPD FYFN L+  +LQSRT 
Sbjct: 36  IESEFGHHDSSVARINNGSFGCCPASILSAQRRWQLQYLRQPDHFYFNDLKSAVLQSRTL 95

Query: 243 IKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTVIMLRYTYGAVKKLIH 422
           IK+L+NA  ++E++I+DN TTAAAIVLQH +W F +GK+ +GD V+ML Y YGAVKK + 
Sbjct: 96  IKDLVNADHVDEISIVDNATTAAAIVLQHTAWNFREGKFQKGDVVLMLHYAYGAVKKSME 155

Query: 423 AYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVILAVI 566
           AY++R GGNV+E  +PFPV SN++IV  FR+AL + K NGN+V LAVI
Sbjct: 156 AYVTRAGGNVVEVPLPFPVNSNDEIVSEFRKALERGKSNGNRVRLAVI 203


>ref|XP_002512578.1| cysteine desulfurylase, putative [Ricinus communis]
           gi|223548539|gb|EEF50030.1| cysteine desulfurylase,
           putative [Ricinus communis]
          Length = 456

 Score =  228 bits (581), Expect = 5e-58
 Identities = 105/168 (62%), Positives = 137/168 (81%)
 Frame = +3

Query: 63  VQEEFSHHDQTIARINNGSFGSCPASIISAQHQWQLRFLQQPDDFYFNHLQPGLLQSRTA 242
           +Q EF HHD ++ARINNGSFGSCP S+ISAQH WQL+FL+QPD+FYFN L+PG+L SR+ 
Sbjct: 36  IQSEFCHHDASVARINNGSFGSCPNSVISAQHDWQLQFLEQPDNFYFNKLKPGILHSRSI 95

Query: 243 IKNLINAAFLEEVAIIDNVTTAAAIVLQHISWGFVQGKYHRGDTVIMLRYTYGAVKKLIH 422
           IK LINA  ++EV+++DN TTAAAIVLQ I+  F +G++++GD  +ML Y YGAVKK + 
Sbjct: 96  IKTLINANHVDEVSLVDNATTAAAIVLQRIARSFSEGRFNKGDVAVMLHYAYGAVKKSVE 155

Query: 423 AYISRMGGNVIEAAVPFPVQSNEQIVMAFRQALGKAKENGNKVILAVI 566
           AY++R GG+VIE  +PFPV+S E+IV  FR+ALG+ KE+G KV LAVI
Sbjct: 156 AYVTRAGGHVIEVQLPFPVKSEEEIVTEFRKALGRGKEDGKKVRLAVI 203


Top