BLASTX nr result

ID: Coptis23_contig00024569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024569
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510668.1| AMP dependent ligase, putative [Ricinus comm...   144   1e-32
ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI...   142   2e-32
ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain...   137   1e-30
emb|CBI38405.3| unnamed protein product [Vitis vinifera]              137   1e-30

>ref|XP_002510668.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223551369|gb|EEF52855.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 551

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/109 (65%), Positives = 86/109 (78%)
 Frame = +2

Query: 2   LTQLGISYGDVVAVLAPNTSAIYELHFGVPMAGAILCTFNVRHDSAMVSILLRHSEAKVL 181
           L  LGI+ GDVVA LAPN  A+YELHFGVPMAGA+LCT NVRHDSAMVS+LLRHSEAKV+
Sbjct: 56  LVHLGINRGDVVAALAPNIPALYELHFGVPMAGAVLCTLNVRHDSAMVSVLLRHSEAKVI 115

Query: 182 FVDHQFVEVAHGALELLSLTKSKLPRLVIVPESHKRSHIASISNTNFNS 328
           FVDHQF+++A GALE+LS   +KLP  V+V E  + + I+S  +  F S
Sbjct: 116 FVDHQFLQIAQGALEILSKLGTKLPMFVLVQECGQPTPISSSGHLEFES 164


>ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 566

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/95 (70%), Positives = 82/95 (86%)
 Frame = +2

Query: 2   LTQLGISYGDVVAVLAPNTSAIYELHFGVPMAGAILCTFNVRHDSAMVSILLRHSEAKVL 181
           +T LGIS GDVVA LAPN  A+YELHFGVPMAGA+LCT N+RHDSAMVS LL+HSEAK++
Sbjct: 65  ITHLGISRGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNIRHDSAMVSTLLKHSEAKMI 124

Query: 182 FVDHQFVEVAHGALELLSLTKSKLPRLVIVPESHK 286
           FVD+Q ++ A GALE+LS T++KLPRLV++PE  K
Sbjct: 125 FVDYQLLDTAQGALEILSKTRTKLPRLVLIPECDK 159


>ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|222857236|gb|EEE94783.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/101 (66%), Positives = 84/101 (83%)
 Frame = +2

Query: 2   LTQLGISYGDVVAVLAPNTSAIYELHFGVPMAGAILCTFNVRHDSAMVSILLRHSEAKVL 181
           L  LGIS GDVVA LAPN  A+YELHFGVPMAGA+LCT NVRHDS+MVS+LL+HSEAK++
Sbjct: 56  LAHLGISPGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNVRHDSSMVSVLLKHSEAKLI 115

Query: 182 FVDHQFVEVAHGALELLSLTKSKLPRLVIVPESHKRSHIAS 304
           FVD+Q + +A GALE+LS  K+KLP LV++PE  + + I+S
Sbjct: 116 FVDYQCLPIAQGALEILSERKTKLPLLVLIPECGQPAAISS 156


>ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
           ligase-like [Vitis vinifera]
          Length = 419

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/93 (72%), Positives = 80/93 (86%)
 Frame = +2

Query: 2   LTQLGISYGDVVAVLAPNTSAIYELHFGVPMAGAILCTFNVRHDSAMVSILLRHSEAKVL 181
           LTQLGIS GDVVAVLAPN  A+YELHFGVPMAGA+LCT N RH+SAMVS LLRHSEAK++
Sbjct: 100 LTQLGISRGDVVAVLAPNVPAMYELHFGVPMAGAVLCTLNTRHNSAMVSTLLRHSEAKII 159

Query: 182 FVDHQFVEVAHGALELLSLTKSKLPRLVIVPES 280
           FVD+Q +E+AH AL+LL  T++K P LV++ ES
Sbjct: 160 FVDYQLLEIAHVALDLLKKTETKPPILVLIVES 192


>emb|CBI38405.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/93 (72%), Positives = 80/93 (86%)
 Frame = +2

Query: 2   LTQLGISYGDVVAVLAPNTSAIYELHFGVPMAGAILCTFNVRHDSAMVSILLRHSEAKVL 181
           LTQLGIS GDVVAVLAPN  A+YELHFGVPMAGA+LCT N RH+SAMVS LLRHSEAK++
Sbjct: 100 LTQLGISRGDVVAVLAPNVPAMYELHFGVPMAGAVLCTLNTRHNSAMVSTLLRHSEAKII 159

Query: 182 FVDHQFVEVAHGALELLSLTKSKLPRLVIVPES 280
           FVD+Q +E+AH AL+LL  T++K P LV++ ES
Sbjct: 160 FVDYQLLEIAHVALDLLKKTETKPPILVLIVES 192


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