BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024565
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524649.1| conserved hypothetical protein [Ricinus comm...   181   2e-43
ref|NP_196975.1| proteasome assembly chaperone 3 [Arabidopsis th...   178   1e-42
ref|XP_002871627.1| hypothetical protein ARALYDRAFT_325939 [Arab...   177   3e-42
ref|XP_003602056.1| Proteasome assembly chaperone [Medicago trun...   177   3e-42
ref|XP_002277524.1| PREDICTED: proteasome assembly chaperone 3 [...   176   4e-42

>ref|XP_002524649.1| conserved hypothetical protein [Ricinus communis]
           gi|223536010|gb|EEF37668.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  181 bits (458), Expect = 2e-43
 Identities = 89/122 (72%), Positives = 105/122 (86%)
 Frame = +1

Query: 40  SSSRCFPVSQKKLSLDIKGNKTDIVLCSYDDHILVMASQIGSMGTILHARKEEGMSIDPT 219
           SS + FPV  KK S+DIKGNKTDIV+CSYDDH LV+A+QI +MG+ILHARKEEG+S+ PT
Sbjct: 3   SSLQHFPVPHKKFSVDIKGNKTDIVICSYDDHFLVIATQIETMGSILHARKEEGVSVHPT 62

Query: 220 YNVSVILGKRDEPMLMACGRQLIQHISSSRSPKPLVLSLGLKDHSLETLKAIVSTVVENR 399
           +NVSVI GKR+EPML+AC R+LI+HIS+S S   LVLSLGLKDHS+ETLK IVS VVENR
Sbjct: 63  FNVSVIFGKRNEPMLVACARKLIEHISNSGSSGALVLSLGLKDHSMETLKGIVSAVVENR 122

Query: 400 LW 405
            W
Sbjct: 123 SW 124


>ref|NP_196975.1| proteasome assembly chaperone 3 [Arabidopsis thaliana]
           gi|9755739|emb|CAC01870.1| putative protein [Arabidopsis
           thaliana] gi|21537125|gb|AAM61466.1| unknown
           [Arabidopsis thaliana] gi|26450350|dbj|BAC42291.1|
           unknown protein [Arabidopsis thaliana]
           gi|28827716|gb|AAO50702.1| unknown protein [Arabidopsis
           thaliana] gi|332004682|gb|AED92065.1| proteasome
           assembly chaperone 3 [Arabidopsis thaliana]
          Length = 124

 Score =  178 bits (451), Expect = 1e-42
 Identities = 85/117 (72%), Positives = 103/117 (88%)
 Frame = +1

Query: 55  FPVSQKKLSLDIKGNKTDIVLCSYDDHILVMASQIGSMGTILHARKEEGMSIDPTYNVSV 234
           FPV  +K+S + KGNKT+IV+CSY+DHIL++A+QIG+MGTILHARKEEGMS++PT++VSV
Sbjct: 8   FPVRHRKVSFESKGNKTEIVICSYEDHILIIATQIGAMGTILHARKEEGMSVEPTFSVSV 67

Query: 235 ILGKRDEPMLMACGRQLIQHISSSRSPKPLVLSLGLKDHSLETLKAIVSTVVENRLW 405
           I GKRDEPML A  R+LI+HISS    KPLVLSLGLKDHS ETLK IV+TV+ENRLW
Sbjct: 68  IFGKRDEPMLTATARRLIEHISSIVPSKPLVLSLGLKDHSSETLKEIVATVIENRLW 124


>ref|XP_002871627.1| hypothetical protein ARALYDRAFT_325939 [Arabidopsis lyrata subsp.
           lyrata] gi|297317464|gb|EFH47886.1| hypothetical protein
           ARALYDRAFT_325939 [Arabidopsis lyrata subsp. lyrata]
          Length = 124

 Score =  177 bits (448), Expect = 3e-42
 Identities = 85/117 (72%), Positives = 102/117 (87%)
 Frame = +1

Query: 55  FPVSQKKLSLDIKGNKTDIVLCSYDDHILVMASQIGSMGTILHARKEEGMSIDPTYNVSV 234
           FPV  + +S + KGNKT+IV+CSY+DHILV+A+QIG+MGTILHARKEEGMS++PT++VSV
Sbjct: 8   FPVRHRNISFESKGNKTEIVICSYEDHILVIATQIGAMGTILHARKEEGMSVEPTFSVSV 67

Query: 235 ILGKRDEPMLMACGRQLIQHISSSRSPKPLVLSLGLKDHSLETLKAIVSTVVENRLW 405
           I GKRDEPML A  R+LI+HISS    KPLVLSLGLKDHS ETLK IV+TV+ENRLW
Sbjct: 68  IFGKRDEPMLTATARRLIEHISSIVPSKPLVLSLGLKDHSSETLKEIVATVIENRLW 124


>ref|XP_003602056.1| Proteasome assembly chaperone [Medicago truncatula]
           gi|357520335|ref|XP_003630456.1| Proteasome assembly
           chaperone [Medicago truncatula]
           gi|355491104|gb|AES72307.1| Proteasome assembly
           chaperone [Medicago truncatula]
           gi|355524478|gb|AET04932.1| Proteasome assembly
           chaperone [Medicago truncatula]
          Length = 130

 Score =  177 bits (448), Expect = 3e-42
 Identities = 83/117 (70%), Positives = 102/117 (87%)
 Frame = +1

Query: 55  FPVSQKKLSLDIKGNKTDIVLCSYDDHILVMASQIGSMGTILHARKEEGMSIDPTYNVSV 234
           FPVSQ   S++IKGNKT+I++ SY+DH +V+A+QIG+MGTILHARKEEGMSI PT+NVSV
Sbjct: 14  FPVSQLNFSIEIKGNKTEIIISSYEDHFMVVATQIGAMGTILHARKEEGMSISPTFNVSV 73

Query: 235 ILGKRDEPMLMACGRQLIQHISSSRSPKPLVLSLGLKDHSLETLKAIVSTVVENRLW 405
           + GKRDEPML+AC RQLI+H++ S   KPLVLSLGLKDHS+ETLK IVS V++ RLW
Sbjct: 74  LFGKRDEPMLVACARQLIEHMTLSGVSKPLVLSLGLKDHSVETLKGIVSAVIDKRLW 130


>ref|XP_002277524.1| PREDICTED: proteasome assembly chaperone 3 [Vitis vinifera]
           gi|296087655|emb|CBI34911.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  176 bits (447), Expect = 4e-42
 Identities = 85/117 (72%), Positives = 102/117 (87%)
 Frame = +1

Query: 55  FPVSQKKLSLDIKGNKTDIVLCSYDDHILVMASQIGSMGTILHARKEEGMSIDPTYNVSV 234
           FPVS KKL  DIKGNKT++V+CSYDD  LV+A+QIG MGTILHARKEEG+SI PT+NVSV
Sbjct: 4   FPVSVKKLCFDIKGNKTNVVICSYDDCFLVIATQIGGMGTILHARKEEGVSIHPTFNVSV 63

Query: 235 ILGKRDEPMLMACGRQLIQHISSSRSPKPLVLSLGLKDHSLETLKAIVSTVVENRLW 405
           + GKRDEPML+A  RQLI+HISSS S + LVLSLGLKDHS+ET++ I+S V+ENR+W
Sbjct: 64  LFGKRDEPMLVASARQLIEHISSSGSSRSLVLSLGLKDHSMETVRGIMSAVIENRVW 120