BLASTX nr result

ID: Coptis23_contig00024564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024564
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002320413.1| predicted protein [Populus trichocarpa] gi|222861186|gb|EEE98728.1|
           predicted protein [Populus trichocarpa]
          Length = 692

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
 Frame = +1

Query: 1   VSSKNSAA-------FHSRKQCSKPPSVGQTWETIVKTSNVYHSHLRFSEESITPLPQ 153
           VSS+NS++        HSR Q SK  S    WETIV+T+N+ H HLRFSE+ + P+P+
Sbjct: 634 VSSRNSSSRSPLGMHLHSRVQASKTLSDDPKWETIVRTANIQHGHLRFSEDLLAPIPE 691


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