BLASTX nr result

ID: Coptis23_contig00024553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024553
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22285.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|AFK43731.1| unknown [Lotus japonicus]                               93   3e-17
ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|1...    92   5e-17
ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold ...    92   6e-17

>emb|CBI22285.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  102 bits (254), Expect = 4e-20
 Identities = 48/59 (81%), Positives = 54/59 (91%)
 Frame = +1

Query: 1   SAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 177
           SAG+ILENN+T+GECRSP+CDIPG VTTMHVVVQ PS+DK EKK A+ PKQNKCVCVIL
Sbjct: 60  SAGKILENNRTIGECRSPLCDIPGGVTTMHVVVQPPSSDK-EKKVASQPKQNKCVCVIL 117


>ref|XP_002324093.1| predicted protein [Populus trichocarpa] gi|222867095|gb|EEF04226.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +1

Query: 1   SAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 177
           SAG+ILENN+T+GECRSP+CDIPG VTTMHVVVQ  S +KG KK AN  KQ+KCVCVIL
Sbjct: 60  SAGKILENNRTVGECRSPLCDIPGGVTTMHVVVQPSSVEKG-KKGANQAKQSKCVCVIL 117


>gb|AFK43731.1| unknown [Lotus japonicus]
          Length = 117

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/59 (71%), Positives = 53/59 (89%)
 Frame = +1

Query: 1   SAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 177
           SAG+IL+NN+T+GEC+SP+CD P TVTTMHVVVQ P+T+K EKK A++ KQNKC+CVIL
Sbjct: 60  SAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEK-EKKAASETKQNKCLCVIL 117


>ref|XP_002305375.1| predicted protein [Populus trichocarpa] gi|118489660|gb|ABK96631.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222848339|gb|EEE85886.1| predicted protein [Populus
           trichocarpa]
          Length = 117

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = +1

Query: 1   SAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 177
           SAG+ILENN+T+GEC+SP+CDIPG VTTMHVVV   S +K EKK AN P+Q+KCVCVIL
Sbjct: 60  SAGKILENNRTVGECQSPLCDIPGGVTTMHVVVHPSSVEK-EKKAANQPRQSKCVCVIL 117


>ref|XP_003531843.1| PREDICTED: membrane-anchored ubiquitin-fold protein 2-like [Glycine
           max]
          Length = 117

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 43/59 (72%), Positives = 51/59 (86%)
 Frame = +1

Query: 1   SAGRILENNKTLGECRSPMCDIPGTVTTMHVVVQTPSTDKGEKKTANDPKQNKCVCVIL 177
           SAG+ILENN+T+GEC+SP+CD P TVTTMHVVVQ P+T+K EKK AN   QNKC+CVIL
Sbjct: 60  SAGKILENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEK-EKKAANKATQNKCMCVIL 117


Top