BLASTX nr result

ID: Coptis23_contig00024550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024550
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26736.1| unknown [Picea sitchensis]                             154   2e-35
dbj|BAJ99891.1| predicted protein [Hordeum vulgare subsp. vulgare]    149   9e-34
emb|CBI29896.3| unnamed protein product [Vitis vinifera]              148   1e-33
ref|XP_002442194.1| hypothetical protein SORBIDRAFT_08g016180 [S...   148   1e-33
ref|NP_187825.1| protein cornichon-1 [Arabidopsis thaliana] gi|7...   148   2e-33

>gb|ABK26736.1| unknown [Picea sitchensis]
          Length = 149

 Score =  154 bits (390), Expect = 2e-35
 Identities = 69/133 (51%), Positives = 97/133 (72%)
 Frame = +3

Query: 93  MAWELTIWIFNFLCVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 272
           MAWE+ +W+ +F+ VIALL    +Q ICL+DLE D  NPYD+ S +N  VIPEF+IQG L
Sbjct: 1   MAWEVLLWLLSFIFVIALLGFVVYQLICLSDLEFDYINPYDSTSRINRLVIPEFMIQGVL 60

Query: 273 CVIFLLMGHWVLLLLSAPLTLYHIKLYRSRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 452
           C++FLL G W + L++APL  YH +LY  RKHL+DVTEIF  LN +K+ R++K  +Y +L
Sbjct: 61  CLLFLLTGCWFMCLITAPLVYYHAQLYVRRKHLVDVTEIFNLLNAEKKYRMIKLVYYLIL 120

Query: 453 FFNCLIRIIQAAV 491
           FF  + R++ ++V
Sbjct: 121 FFIVIYRLVSSSV 133


>dbj|BAJ99891.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 149

 Score =  149 bits (375), Expect = 9e-34
 Identities = 70/133 (52%), Positives = 95/133 (71%)
 Frame = +3

Query: 93  MAWELTIWIFNFLCVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 272
           M+ EL +W+F+F  V+AL+ LT +Q ICL+DLE D  NPYD++S +NA VI E+ +QG L
Sbjct: 1   MSVELVLWLFSFASVMALVGLTAYQLICLSDLEFDYINPYDSSSRINAVVIIEYTLQGVL 60

Query: 273 CVIFLLMGHWVLLLLSAPLTLYHIKLYRSRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 452
           C  FLL  +W   L+ AP+T YH+KLY +RKHLIDVTEIFR L+ +K+ RL+K  FY  L
Sbjct: 61  CASFLLTLNWFPFLVMAPVTYYHVKLYMNRKHLIDVTEIFRQLHGEKKYRLIKLAFYFAL 120

Query: 453 FFNCLIRIIQAAV 491
           F   + R++  AV
Sbjct: 121 FIISIYRLVMTAV 133


>emb|CBI29896.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  148 bits (374), Expect = 1e-33
 Identities = 65/131 (49%), Positives = 95/131 (72%)
 Frame = +3

Query: 93  MAWELTIWIFNFLCVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 272
           M+WEL +WI  F   IALL  T +Q +CL+DLE+D  NPY+++S +N+ V+P+F++QG L
Sbjct: 1   MSWELILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVL 60

Query: 273 CVIFLLMGHWVLLLLSAPLTLYHIKLYRSRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 452
           C++FLL  HW L L+S P+T Y+  L+  R+HLIDVTE+FR+L+ +K+ R+ K  FY  L
Sbjct: 61  CILFLLTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFL 120

Query: 453 FFNCLIRIIQA 485
           F   +IRI+ A
Sbjct: 121 FIIVIIRILAA 131


>ref|XP_002442194.1| hypothetical protein SORBIDRAFT_08g016180 [Sorghum bicolor]
           gi|241942887|gb|EES16032.1| hypothetical protein
           SORBIDRAFT_08g016180 [Sorghum bicolor]
          Length = 149

 Score =  148 bits (374), Expect = 1e-33
 Identities = 67/133 (50%), Positives = 95/133 (71%)
 Frame = +3

Query: 93  MAWELTIWIFNFLCVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 272
           M+ EL +W+F+F  V+ L+ LT +Q ICL+DLE D  NPYD++S +NA V+ E+ +QG L
Sbjct: 1   MSVELVLWLFSFASVMVLIGLTAYQLICLSDLEYDYINPYDSSSRINAVVLIEYSLQGAL 60

Query: 273 CVIFLLMGHWVLLLLSAPLTLYHIKLYRSRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 452
           C  FLL  HW   L+ AP+T YH+KLY +RKHL+DVTEIFR L+++K+ R++K  FY  L
Sbjct: 61  CASFLLTLHWFPFLVMAPVTYYHVKLYLARKHLVDVTEIFRQLSDEKKYRMIKLAFYFCL 120

Query: 453 FFNCLIRIIQAAV 491
           F   + R++  AV
Sbjct: 121 FIITIYRLVMTAV 133


>ref|NP_187825.1| protein cornichon-1 [Arabidopsis thaliana]
           gi|75169292|sp|Q9C7D7.1|CNIH1_ARATH RecName:
           Full=Protein cornichon homolog 1
           gi|12322050|gb|AAG51073.1|AC069472_13 unknown protein;
           8145-9251 [Arabidopsis thaliana]
           gi|30017219|gb|AAP12843.1| At3g12180 [Arabidopsis
           thaliana] gi|110735780|dbj|BAE99867.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332641641|gb|AEE75162.1| protein cornichon-1
           [Arabidopsis thaliana]
          Length = 146

 Score =  148 bits (373), Expect = 2e-33
 Identities = 64/133 (48%), Positives = 96/133 (72%)
 Frame = +3

Query: 93  MAWELTIWIFNFLCVIALLVLTGFQFICLTDLESDQSNPYDTASHVNACVIPEFVIQGTL 272
           MAW+L +WI +F   +AL+    +Q ICLTDLE+D  NP++T++ +N  VIPEF++QG+L
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 273 CVIFLLMGHWVLLLLSAPLTLYHIKLYRSRKHLIDVTEIFRSLNEDKRDRLVKFGFYAVL 452
           C++FLL  HWV  L++ P+T+YH  LY+ R++LIDVTE+FR ++ +K+ R  K GFY  L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 453 FFNCLIRIIQAAV 491
           F   + R+  +AV
Sbjct: 121 FIMVVFRLTLSAV 133


Top