BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024536
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   171   3e-40
emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]   171   3e-40
ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   166   6e-39
ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   166   8e-39
ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative...   165   1e-38

>ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Vitis vinifera]
          Length = 806

 Score =  171 bits (432), Expect = 3e-40
 Identities = 105/289 (36%), Positives = 148/289 (51%)
 Frame = +2

Query: 104 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPFSI 283
           M +G A  L R  SSK ++SR R+    + +H   +       +    S F      F  
Sbjct: 1   MARGPAALLSRIRSSKHDVSRFRVFPSKRCIHSFGEW------RNPTASAFDLSKPAFFT 54

Query: 284 NGICRNRGHLLSSSFYVLGQKGYSNSSKCLDFGHISTQLCRVSTKLVNLDGVQFRKGFNL 463
           +    N  HL S+S    G     +    +   H S+           + G+    G ++
Sbjct: 55  S--LMNLVHLQSAS----GSPNLRDFRNSIGARHFSSMREDGDGDENTVPGLTIEDGDDV 108

Query: 464 VQLNWFSSLIXXXXXXXXXXXXXXXXXXXGSDGDSSKNVDSFDHVASRDPVGFYRELKNI 643
             ++  S+++                    SD   S     ++HVA RDP   YREL + 
Sbjct: 109 SSIS-DSTMVENGDEGKSNCDSSMVESGNSSDDVGSGESVGYEHVAYRDPAELYRELCDS 167

Query: 644 ETSVKRTRKDWDILVEIFRSFARSGWASDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDV 823
           +TS K T+ DW+++ EI   F +SGWA++Q+LAIYIG  FFPTA  KFRSF  K+C  DV
Sbjct: 168 QTSAKPTKSDWEMVSEILHHFRKSGWAANQALAIYIGMSFFPTAASKFRSFMSKKCTADV 227

Query: 824 AKYLVSVGPSEESERILFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPH 970
           AKYL S+GP + + + LFPIF EFCLE+FP+EIK FR ++ SADLTKPH
Sbjct: 228 AKYLASLGPGDAAVKFLFPIFVEFCLEEFPDEIKRFRSMIKSADLTKPH 276


>emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]
          Length = 906

 Score =  171 bits (432), Expect = 3e-40
 Identities = 105/289 (36%), Positives = 148/289 (51%)
 Frame = +2

Query: 104 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPFSI 283
           M +G A  L R  SSK ++SR R+    + +H   +       +    S F      F  
Sbjct: 48  MARGPAALLSRIRSSKHDVSRFRVFPSKRCIHSFGEW------RNPTASAFDLSKPAFFT 101

Query: 284 NGICRNRGHLLSSSFYVLGQKGYSNSSKCLDFGHISTQLCRVSTKLVNLDGVQFRKGFNL 463
           +    N  HL S+S    G     +    +   H S+           + G+    G ++
Sbjct: 102 S--LMNLVHLQSAS----GSPNLRDFXNSIGARHFSSMREDGDGDENTVPGLTIEDGDDV 155

Query: 464 VQLNWFSSLIXXXXXXXXXXXXXXXXXXXGSDGDSSKNVDSFDHVASRDPVGFYRELKNI 643
             ++  S+++                    SD   S     ++HVA RDP   YREL + 
Sbjct: 156 SSIS-DSTMVENGDEGKSNCDSSMVESGNSSDDVGSGESVGYEHVAYRDPAELYRELCDS 214

Query: 644 ETSVKRTRKDWDILVEIFRSFARSGWASDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDV 823
           +TS K T+ DW+++ EI   F +SGWA++Q+LAIYIG  FFPTA  KFRSF  K+C  DV
Sbjct: 215 QTSAKPTKSDWEMVSEILHHFRKSGWAANQALAIYIGMSFFPTAASKFRSFMSKKCTADV 274

Query: 824 AKYLVSVGPSEESERILFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPH 970
           AKYL S+GP + + + LFPIF EFCLE+FP+EIK FR ++ SADLTKPH
Sbjct: 275 AKYLASLGPGDAAVKFLFPIFVEFCLEEFPDEIKRFRSMIKSADLTKPH 323


>ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Glycine max]
          Length = 829

 Score =  166 bits (421), Expect = 6e-39
 Identities = 82/142 (57%), Positives = 102/142 (71%), Gaps = 2/142 (1%)
 Frame = +2

Query: 551 GSDGDSS--KNVDSFDHVASRDPVGFYRELKNIETSVKRTRKDWDILVEIFRSFARSGWA 724
           GSD ++   K  + F HVASR PV  YRE+  +E   +  R + ++L+E+   FA+SGWA
Sbjct: 146 GSDNNNELGKKNEEFMHVASRGPVELYREMCRVEWGPRLDRTEVEVLLEVCHWFAKSGWA 205

Query: 725 SDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESERILFPIFAEFCLE 904
           S+Q+LAIYIG  FFPTA  KF  F  K+CP DVAKYLV +GPS+E+ R LFPIF EFCLE
Sbjct: 206 SNQALAIYIGMSFFPTAAHKFHKFLKKKCPTDVAKYLVYLGPSDEAMRFLFPIFVEFCLE 265

Query: 905 KFPNEIKLFRDIVHSADLTKPH 970
            FP+EIK FR +V SADLTKPH
Sbjct: 266 NFPDEIKRFRSMVESADLTKPH 287


>ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
           [Cucumis sativus]
          Length = 795

 Score =  166 bits (420), Expect = 8e-39
 Identities = 108/296 (36%), Positives = 159/296 (53%), Gaps = 7/296 (2%)
 Frame = +2

Query: 104 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPFSI 283
           M +G AT+L R +SS+++ SR R+   N+ LH + Q     + + + +  FST  +    
Sbjct: 1   MFRGPATTLLRISSSRKSASRFRIFTGNRLLHSVGQYDDHKILQSNPVRPFSTTVNQVWF 60

Query: 284 NGICRNRGHLLSSSFYVLGQK---GYSNSSKCLDFGHISTQLCRVSTKLVNLDGVQFRKG 454
             + +     + SSF +       G    +K  D   +S      S+ +V + G     G
Sbjct: 61  RLLSQRSRFGVFSSFNLRRISIPVGPEADNK--DGNGVS------SSNVVEVGGYDADVG 112

Query: 455 FNLVQLNWFSSLIXXXXXXXXXXXXXXXXXXXGSDGDS---SKNVDSFDHVASRDPVGFY 625
            N+   N   S++                     +GDS   S  + +++ + S DPV  Y
Sbjct: 113 KNVCFEN--DSMMVTGEDGCIGDSIRGSIVDDSKNGDSDLRSSKLRNYETIKSCDPVELY 170

Query: 626 RELKNIETSVKRTR-KDWDILVEIFRSFARSGWASDQSLAIYIGALFFPTAVQKFRSFFI 802
            EL+++E    +    DW IL EIF  F  SGWAS+Q+L IYIG  FFPTAV KFR+FF+
Sbjct: 171 SELRSVEMGGSKVELSDWLILQEIFHYFLHSGWASNQALGIYIGMSFFPTAVSKFRNFFL 230

Query: 803 KRCPNDVAKYLVSVGPSEESERILFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPH 970
           K+C  DV KYLV +GPS+++ + LFPIF E+CL +FP+EIK F+ +V SADLTKPH
Sbjct: 231 KKCSTDVVKYLVFLGPSDDAVKFLFPIFVEYCLVEFPDEIKRFQSMVKSADLTKPH 286


>ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
           gi|223536331|gb|EEF37981.1| ATP-dependent RNA and DNA
           helicase, putative [Ricinus communis]
          Length = 820

 Score =  165 bits (418), Expect = 1e-38
 Identities = 105/297 (35%), Positives = 158/297 (53%), Gaps = 8/297 (2%)
 Frame = +2

Query: 104 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPFSI 283
           M +G   SLFR  +SK  +SR R+ L NQ+ H   Q     V +  ++S F      FS 
Sbjct: 1   MARGPVASLFRAYASKSKISRCRVFLYNQNFHSFRQFNNW-VLQSYHLSPFDVTCHHFST 59

Query: 284 NGICRNRGHLLSSSF--YVLGQKGYSNSSKCLDFGHISTQLCRVSTK---LVNLDGVQFR 448
           + +      L SS++  + +  + +S+  +  D  + +      +     L N+D     
Sbjct: 60  SFVDLINSQLPSSNYPKFTINWRTFSSFDQDGDNKNSANSELEENDTVDILENVDENTME 119

Query: 449 KGFNLVQLNWFSSLIXXXXXXXXXXXXXXXXXXXGSDGDSSKNVDSF---DHVASRDPVG 619
            G + V  + FS  +                     D + +++ +     ++VA RD + 
Sbjct: 120 DGADGVNESTFSDPLVVDNENRCVNESTFSDPLVVDDENGNQDSNDLVRKENVAFRDAIE 179

Query: 620 FYRELKNIETSVKRTRKDWDILVEIFRSFARSGWASDQSLAIYIGALFFPTAVQKFRSFF 799
            YREL+N E +    R DWD L EIF  FA SGWA++Q+LAIYIG  FFPTA + FR+FF
Sbjct: 180 LYRELRNAEKNDTLKRSDWDTLQEIFYYFANSGWAANQALAIYIGRSFFPTAARNFRNFF 239

Query: 800 IKRCPNDVAKYLVSVGPSEESERILFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPH 970
            K+   ++A YLVS+GPS+ + R LFPIF E+C+E+FP+EIK F+ ++ SADL KPH
Sbjct: 240 CKKSSAELALYLVSIGPSDAAVRFLFPIFVEYCIEEFPDEIKRFQGMLQSADLRKPH 296