BLASTX nr result
ID: Coptis23_contig00024526
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024526 (657 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation... 170 3e-40 ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|2... 163 3e-38 ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|2235... 162 4e-38 ref|XP_003575149.1| PREDICTED: eukaryotic translation initiation... 162 7e-38 ref|XP_003534415.1| PREDICTED: eukaryotic translation initiation... 160 2e-37 >ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation factor 2D [Vitis vinifera] gi|297734795|emb|CBI17029.3| unnamed protein product [Vitis vinifera] Length = 609 Score = 170 bits (430), Expect = 3e-40 Identities = 85/114 (74%), Positives = 94/114 (82%) Frame = -1 Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163 G F VYALWKVP+LLP F+LKGG+VS F+IGGA LMFPGISIPAEG+ F G+PWA Sbjct: 76 GTEIFPTVYALWKVPDLLPAFILKGGEVSRFVIGGADLMFPGISIPAEGLPSFAEGEPWA 135 Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1 V VP N+APIAVGTTTMSST ALKAGLRGKALRITH YRDSL + + EGHYV N Sbjct: 136 VKVPGNLAPIAVGTTTMSSTAALKAGLRGKALRITHYYRDSLWE-LVEGHYVPN 188 >ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|222857691|gb|EEE95238.1| predicted protein [Populus trichocarpa] Length = 597 Score = 163 bits (412), Expect = 3e-38 Identities = 81/114 (71%), Positives = 92/114 (80%) Frame = -1 Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163 G F V+ALWKVPE+LP F+LKGG+VS F+IGGA LMFPGISIPAEG+ F G+PWA Sbjct: 76 GSEIFPTVFALWKVPEMLPSFILKGGEVSQFVIGGADLMFPGISIPAEGLPSFLVGEPWA 135 Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1 V VP N APIAVG+TTMS+ EALKAGLRGKALRITH YRD L + + EGHYV N Sbjct: 136 VKVPGNPAPIAVGSTTMSTAEALKAGLRGKALRITHYYRDLLWESV-EGHYVPN 188 >ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|223537304|gb|EEF38935.1| ligatin, putative [Ricinus communis] Length = 616 Score = 162 bits (411), Expect = 4e-38 Identities = 81/114 (71%), Positives = 92/114 (80%) Frame = -1 Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163 G F V+ALW VPE LP FMLKGG+VS +I+GGA LMFPGISIPAEG+ F AG+PWA Sbjct: 76 GTDIFPTVFALWNVPEFLPSFMLKGGEVSRYILGGADLMFPGISIPAEGLPSFSAGEPWA 135 Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1 V VP N APIAVG+TTMSS+EA+KAGLRGKALRITH YRD L + + EGHYV N Sbjct: 136 VKVPGNPAPIAVGSTTMSSSEAIKAGLRGKALRITHYYRDLLWESV-EGHYVPN 188 >ref|XP_003575149.1| PREDICTED: eukaryotic translation initiation factor 2D-like [Brachypodium distachyon] Length = 597 Score = 162 bits (409), Expect = 7e-38 Identities = 81/114 (71%), Positives = 89/114 (78%) Frame = -1 Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163 G F VYALWKVP LLP F LKGG+VSH+I+GGA LMFPGIS+P EG+ FQAGQPW+ Sbjct: 76 GHELFPTVYALWKVPHLLPAFTLKGGEVSHYILGGADLMFPGISVPPEGLPSFQAGQPWS 135 Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1 V VP N APIAVGTTTMS TEALKAGLRGKALRI H Y+D LL +G YV N Sbjct: 136 VKVPGNPAPIAVGTTTMSDTEALKAGLRGKALRIAHYYKD-LLWASADGRYVPN 188 >ref|XP_003534415.1| PREDICTED: eukaryotic translation initiation factor 2D-like [Glycine max] Length = 611 Score = 160 bits (405), Expect = 2e-37 Identities = 82/114 (71%), Positives = 91/114 (79%) Frame = -1 Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163 G F VYALW VPELLPVF+LKGG+VS F+IGGA LMFPGI++P EG+ F+AG+PWA Sbjct: 76 GSDIFPTVYALWMVPELLPVFVLKGGEVSRFVIGGADLMFPGITVPPEGLPSFRAGEPWA 135 Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1 V VP N APIAVG+TTMSS EALKAGLRGKALRITH YRD LL EGH V N Sbjct: 136 VKVPGNSAPIAVGSTTMSSAEALKAGLRGKALRITHYYRD-LLWESAEGHCVPN 188