BLASTX nr result

ID: Coptis23_contig00024526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024526
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation...   170   3e-40
ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38
ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|2235...   162   4e-38
ref|XP_003575149.1| PREDICTED: eukaryotic translation initiation...   162   7e-38
ref|XP_003534415.1| PREDICTED: eukaryotic translation initiation...   160   2e-37

>ref|XP_002271249.1| PREDICTED: eukaryotic translation initiation factor 2D [Vitis
           vinifera] gi|297734795|emb|CBI17029.3| unnamed protein
           product [Vitis vinifera]
          Length = 609

 Score =  170 bits (430), Expect = 3e-40
 Identities = 85/114 (74%), Positives = 94/114 (82%)
 Frame = -1

Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163
           G   F  VYALWKVP+LLP F+LKGG+VS F+IGGA LMFPGISIPAEG+  F  G+PWA
Sbjct: 76  GTEIFPTVYALWKVPDLLPAFILKGGEVSRFVIGGADLMFPGISIPAEGLPSFAEGEPWA 135

Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1
           V VP N+APIAVGTTTMSST ALKAGLRGKALRITH YRDSL + + EGHYV N
Sbjct: 136 VKVPGNLAPIAVGTTTMSSTAALKAGLRGKALRITHYYRDSLWE-LVEGHYVPN 188


>ref|XP_002319315.1| predicted protein [Populus trichocarpa] gi|222857691|gb|EEE95238.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  163 bits (412), Expect = 3e-38
 Identities = 81/114 (71%), Positives = 92/114 (80%)
 Frame = -1

Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163
           G   F  V+ALWKVPE+LP F+LKGG+VS F+IGGA LMFPGISIPAEG+  F  G+PWA
Sbjct: 76  GSEIFPTVFALWKVPEMLPSFILKGGEVSQFVIGGADLMFPGISIPAEGLPSFLVGEPWA 135

Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1
           V VP N APIAVG+TTMS+ EALKAGLRGKALRITH YRD L + + EGHYV N
Sbjct: 136 VKVPGNPAPIAVGSTTMSTAEALKAGLRGKALRITHYYRDLLWESV-EGHYVPN 188


>ref|XP_002523476.1| ligatin, putative [Ricinus communis] gi|223537304|gb|EEF38935.1|
           ligatin, putative [Ricinus communis]
          Length = 616

 Score =  162 bits (411), Expect = 4e-38
 Identities = 81/114 (71%), Positives = 92/114 (80%)
 Frame = -1

Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163
           G   F  V+ALW VPE LP FMLKGG+VS +I+GGA LMFPGISIPAEG+  F AG+PWA
Sbjct: 76  GTDIFPTVFALWNVPEFLPSFMLKGGEVSRYILGGADLMFPGISIPAEGLPSFSAGEPWA 135

Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1
           V VP N APIAVG+TTMSS+EA+KAGLRGKALRITH YRD L + + EGHYV N
Sbjct: 136 VKVPGNPAPIAVGSTTMSSSEAIKAGLRGKALRITHYYRDLLWESV-EGHYVPN 188


>ref|XP_003575149.1| PREDICTED: eukaryotic translation initiation factor 2D-like
           [Brachypodium distachyon]
          Length = 597

 Score =  162 bits (409), Expect = 7e-38
 Identities = 81/114 (71%), Positives = 89/114 (78%)
 Frame = -1

Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163
           G   F  VYALWKVP LLP F LKGG+VSH+I+GGA LMFPGIS+P EG+  FQAGQPW+
Sbjct: 76  GHELFPTVYALWKVPHLLPAFTLKGGEVSHYILGGADLMFPGISVPPEGLPSFQAGQPWS 135

Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1
           V VP N APIAVGTTTMS TEALKAGLRGKALRI H Y+D LL    +G YV N
Sbjct: 136 VKVPGNPAPIAVGTTTMSDTEALKAGLRGKALRIAHYYKD-LLWASADGRYVPN 188


>ref|XP_003534415.1| PREDICTED: eukaryotic translation initiation factor 2D-like
           [Glycine max]
          Length = 611

 Score =  160 bits (405), Expect = 2e-37
 Identities = 82/114 (71%), Positives = 91/114 (79%)
 Frame = -1

Query: 342 GPRAFSRVYALWKVPELLPVFMLKGGKVSHFIIGGAYLMFPGISIPAEGVLPFQAGQPWA 163
           G   F  VYALW VPELLPVF+LKGG+VS F+IGGA LMFPGI++P EG+  F+AG+PWA
Sbjct: 76  GSDIFPTVYALWMVPELLPVFVLKGGEVSRFVIGGADLMFPGITVPPEGLPSFRAGEPWA 135

Query: 162 VTVPNNVAPIAVGTTTMSSTEALKAGLRGKALRITHCYRDSLLQGICEGHYVSN 1
           V VP N APIAVG+TTMSS EALKAGLRGKALRITH YRD LL    EGH V N
Sbjct: 136 VKVPGNSAPIAVGSTTMSSAEALKAGLRGKALRITHYYRD-LLWESAEGHCVPN 188


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