BLASTX nr result

ID: Coptis23_contig00024522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024522
         (197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30983.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2...   124   8e-27
ref|XP_003527527.1| PREDICTED: ABC transporter C family member 1...   120   2e-25
ref|XP_002317351.1| multidrug resistance protein ABC transporter...   119   3e-25
ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump...   118   4e-25

>emb|CBI30983.3| unnamed protein product [Vitis vinifera]
          Length = 1500

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/65 (90%), Positives = 64/65 (98%)
 Frame = -2

Query: 196 DLSQFVGPVILNYLLQSMQQGDPAWIGYIYAFSIFAGVALGVLCEAQYFQNVMRVGFRLR 17
           DLSQFVGPV+LN+LLQSMQ+GDPAWIGYIYAFSIF GV+LGVLCEAQYFQNVMRVGFRLR
Sbjct: 316 DLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFSIFIGVSLGVLCEAQYFQNVMRVGFRLR 375

Query: 16  ATLVA 2
           +TLVA
Sbjct: 376 STLVA 380


>ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2-like [Vitis vinifera]
          Length = 1624

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/65 (90%), Positives = 64/65 (98%)
 Frame = -2

Query: 196 DLSQFVGPVILNYLLQSMQQGDPAWIGYIYAFSIFAGVALGVLCEAQYFQNVMRVGFRLR 17
           DLSQFVGPV+LN+LLQSMQ+GDPAWIGYIYAFSIF GV+LGVLCEAQYFQNVMRVGFRLR
Sbjct: 314 DLSQFVGPVLLNHLLQSMQRGDPAWIGYIYAFSIFIGVSLGVLCEAQYFQNVMRVGFRLR 373

Query: 16  ATLVA 2
           +TLVA
Sbjct: 374 STLVA 378


>ref|XP_003527527.1| PREDICTED: ABC transporter C family member 12-like [Glycine max]
          Length = 1615

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/65 (84%), Positives = 63/65 (96%)
 Frame = -2

Query: 196 DLSQFVGPVILNYLLQSMQQGDPAWIGYIYAFSIFAGVALGVLCEAQYFQNVMRVGFRLR 17
           DLSQFVGP++LN+LL SMQ+GDP+WIGYIYAFSIF GVA+GVLCEAQYFQNV+RVGFRLR
Sbjct: 314 DLSQFVGPILLNHLLDSMQRGDPSWIGYIYAFSIFVGVAVGVLCEAQYFQNVLRVGFRLR 373

Query: 16  ATLVA 2
           +TLVA
Sbjct: 374 STLVA 378


>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1617

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = -2

Query: 196 DLSQFVGPVILNYLLQSMQQGDPAWIGYIYAFSIFAGVALGVLCEAQYFQNVMRVGFRLR 17
           D SQFVGP++LN LL+SMQ+GDPAWIGY+YAFSIFAGV  GVLCEAQYFQNVMRVG+RLR
Sbjct: 307 DASQFVGPLVLNQLLKSMQEGDPAWIGYVYAFSIFAGVVFGVLCEAQYFQNVMRVGYRLR 366

Query: 16  ATLVA 2
           ATLVA
Sbjct: 367 ATLVA 371


>ref|XP_002526610.1| mgatp-energized glutathione s-conjugate pump, putative [Ricinus
           communis] gi|223534050|gb|EEF35769.1| mgatp-energized
           glutathione s-conjugate pump, putative [Ricinus
           communis]
          Length = 1626

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/65 (84%), Positives = 61/65 (93%)
 Frame = -2

Query: 196 DLSQFVGPVILNYLLQSMQQGDPAWIGYIYAFSIFAGVALGVLCEAQYFQNVMRVGFRLR 17
           DLSQFVGPV+LN+LLQSMQQGD  WIGY+YAFSIF GV+LGVLCE+QYFQNVMR GFRLR
Sbjct: 313 DLSQFVGPVLLNHLLQSMQQGDATWIGYVYAFSIFVGVSLGVLCESQYFQNVMRTGFRLR 372

Query: 16  ATLVA 2
           +TLVA
Sbjct: 373 STLVA 377


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