BLASTX nr result

ID: Coptis23_contig00024520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024520
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   228   5e-58
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]   228   5e-58
emb|CBI40731.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho...   210   8e-53

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  228 bits (580), Expect = 5e-58
 Identities = 115/164 (70%), Positives = 135/164 (82%)
 Frame = +3

Query: 3   RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182
           R+ +TL KREFQHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V  
Sbjct: 341 RKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA- 399

Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362
           HLSG+SVI LEGL+++L YFFS +G  TVDY L LQ+Y+K+DAGS AG WT +FSLWC+N
Sbjct: 400 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLN 459

Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494
           PAV F  IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH
Sbjct: 460 PAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 503


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score =  228 bits (580), Expect = 5e-58
 Identities = 115/164 (70%), Positives = 135/164 (82%)
 Frame = +3

Query: 3   RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182
           R+ +TL KREFQHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V  
Sbjct: 279 RKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA- 337

Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362
           HLSG+SVI LEGL+++L YFFS +G  TVDY L LQ+Y+K+DAGS AG WT +FSLWC+N
Sbjct: 338 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLN 397

Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494
           PAV F  IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH
Sbjct: 398 PAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 441


>emb|CBI40731.3| unnamed protein product [Vitis vinifera]
          Length = 1218

 Score =  214 bits (544), Expect = 8e-54
 Identities = 112/179 (62%), Positives = 133/179 (74%), Gaps = 15/179 (8%)
 Frame = +3

Query: 3   RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182
           R+ +TL KREFQHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V  
Sbjct: 356 RKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA- 414

Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGI----------- 329
           HLSG+SVI LEGL+++L YFFS +G  TVDY L LQ+Y+K+DAG    +           
Sbjct: 415 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGHHLSVRLHLIKLMLVE 474

Query: 330 ----WTQSFSLWCMNPAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494
               WT +FSLWC+NPAV F  IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH
Sbjct: 475 FIQNWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 533


>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
           predicted protein [Populus trichocarpa]
          Length = 1183

 Score =  211 bits (538), Expect = 4e-53
 Identities = 106/164 (64%), Positives = 130/164 (79%)
 Frame = +3

Query: 3   RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182
           RR + L KREFQHY SCW+GDKAL E QEA ISQQ F IL +C+ +A+KAA+D E++ G 
Sbjct: 344 RRKNKLEKREFQHYCSCWAGDKALREFQEANISQQCFPILLDCAKQAIKAATDTEAE-GS 402

Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362
           HLSG+SV+ LEGLF+SL YFFS +G    D+ L L++Y+KRD G KAG WT + SLWC+N
Sbjct: 403 HLSGMSVVLLEGLFSSLTYFFSRNGCQVSDFQLALRRYVKRD-GKKAGDWTCTLSLWCLN 461

Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494
           PAV F +IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH
Sbjct: 462 PAVVFKDIADLSLSVILTSGTLSPMNSFSSELGVQFGTCLEAPH 505


>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
          Length = 1239

 Score =  210 bits (535), Expect = 8e-53
 Identities = 107/164 (65%), Positives = 126/164 (76%)
 Frame = +3

Query: 3   RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182
           +R  TL KREFQHY +CW+G+ A  ELQEA I+QQ F IL EC+TKA+KAASD ES    
Sbjct: 352 QRKTTLQKREFQHYVTCWTGNHAQRELQEANITQQCFPILLECATKAIKAASDTESD-DA 410

Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362
           HLSG+SVI LEGLF+SL YFFS +G    DY L LQ+YIKRD G     WT + SLWC+N
Sbjct: 411 HLSGLSVITLEGLFSSLTYFFSRNGCHMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCLN 470

Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494
           PAV F +I++LS+SVILTSGTLSPM SFSSELG +F TS+EAPH
Sbjct: 471 PAVVFRDISDLSLSVILTSGTLSPMNSFSSELGVQFGTSLEAPH 514


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