BLASTX nr result
ID: Coptis23_contig00024520
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00024520 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li... 228 5e-58 emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] 228 5e-58 emb|CBI40731.3| unnamed protein product [Vitis vinifera] 214 8e-54 ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2... 211 4e-53 ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho... 210 8e-53 >ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera] Length = 1255 Score = 228 bits (580), Expect = 5e-58 Identities = 115/164 (70%), Positives = 135/164 (82%) Frame = +3 Query: 3 RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182 R+ +TL KREFQHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V Sbjct: 341 RKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA- 399 Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362 HLSG+SVI LEGL+++L YFFS +G TVDY L LQ+Y+K+DAGS AG WT +FSLWC+N Sbjct: 400 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLN 459 Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494 PAV F IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH Sbjct: 460 PAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 503 >emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] Length = 1261 Score = 228 bits (580), Expect = 5e-58 Identities = 115/164 (70%), Positives = 135/164 (82%) Frame = +3 Query: 3 RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182 R+ +TL KREFQHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V Sbjct: 279 RKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA- 337 Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362 HLSG+SVI LEGL+++L YFFS +G TVDY L LQ+Y+K+DAGS AG WT +FSLWC+N Sbjct: 338 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLN 397 Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494 PAV F IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH Sbjct: 398 PAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 441 >emb|CBI40731.3| unnamed protein product [Vitis vinifera] Length = 1218 Score = 214 bits (544), Expect = 8e-54 Identities = 112/179 (62%), Positives = 133/179 (74%), Gaps = 15/179 (8%) Frame = +3 Query: 3 RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182 R+ +TL KREFQHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V Sbjct: 356 RKKNTLEKREFQHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRVA- 414 Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGI----------- 329 HLSG+SVI LEGL+++L YFFS +G TVDY L LQ+Y+K+DAG + Sbjct: 415 HLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGHHLSVRLHLIKLMLVE 474 Query: 330 ----WTQSFSLWCMNPAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494 WT +FSLWC+NPAV F IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH Sbjct: 475 FIQNWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPH 533 >ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa] Length = 1183 Score = 211 bits (538), Expect = 4e-53 Identities = 106/164 (64%), Positives = 130/164 (79%) Frame = +3 Query: 3 RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182 RR + L KREFQHY SCW+GDKAL E QEA ISQQ F IL +C+ +A+KAA+D E++ G Sbjct: 344 RRKNKLEKREFQHYCSCWAGDKALREFQEANISQQCFPILLDCAKQAIKAATDTEAE-GS 402 Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362 HLSG+SV+ LEGLF+SL YFFS +G D+ L L++Y+KRD G KAG WT + SLWC+N Sbjct: 403 HLSGMSVVLLEGLFSSLTYFFSRNGCQVSDFQLALRRYVKRD-GKKAGDWTCTLSLWCLN 461 Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494 PAV F +IA+LS+SVILTSGTLSPM SFSSELG +F T +EAPH Sbjct: 462 PAVVFKDIADLSLSVILTSGTLSPMNSFSSELGVQFGTCLEAPH 505 >ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus] Length = 1239 Score = 210 bits (535), Expect = 8e-53 Identities = 107/164 (65%), Positives = 126/164 (76%) Frame = +3 Query: 3 RRADTLVKREFQHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVGE 182 +R TL KREFQHY +CW+G+ A ELQEA I+QQ F IL EC+TKA+KAASD ES Sbjct: 352 QRKTTLQKREFQHYVTCWTGNHAQRELQEANITQQCFPILLECATKAIKAASDTESD-DA 410 Query: 183 HLSGVSVIALEGLFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMN 362 HLSG+SVI LEGLF+SL YFFS +G DY L LQ+YIKRD G WT + SLWC+N Sbjct: 411 HLSGLSVITLEGLFSSLTYFFSRNGCHMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCLN 470 Query: 363 PAVSFTEIANLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPH 494 PAV F +I++LS+SVILTSGTLSPM SFSSELG +F TS+EAPH Sbjct: 471 PAVVFRDISDLSLSVILTSGTLSPMNSFSSELGVQFGTSLEAPH 514