BLASTX nr result

ID: Coptis23_contig00024513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024513
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]   157   1e-36
ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258...   155   2e-36
ref|XP_002513307.1| conserved hypothetical protein [Ricinus comm...   151   5e-35
ref|XP_002310923.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
gb|ABK95143.1| unknown [Populus trichocarpa]                          151   6e-35

>emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]
          Length = 410

 Score =  157 bits (396), Expect = 1e-36
 Identities = 78/109 (71%), Positives = 89/109 (81%), Gaps = 7/109 (6%)
 Frame = +1

Query: 1   AANKPDQAVQVLLASRERLKAQDAA-------TGKSEVNMQDVDPIQVELLLGKAYSDWG 159
           AA KPD+AVQVLLASRERL  + ++       +G  E   Q+VDP+QVELLLGKAYSDWG
Sbjct: 287 AAKKPDEAVQVLLASRERLNKEKSSNLNIKSDSGTKETESQEVDPVQVELLLGKAYSDWG 346

Query: 160 HVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAESMFIQARFF 306
           H+SDAVSVYDQLIS HP DFRGYLAKGIILK+NG +G+AE MFIQARFF
Sbjct: 347 HISDAVSVYDQLISSHPEDFRGYLAKGIILKENGNIGDAERMFIQARFF 395


>ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258138 [Vitis vinifera]
           gi|297735765|emb|CBI18452.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/109 (70%), Positives = 89/109 (81%), Gaps = 7/109 (6%)
 Frame = +1

Query: 1   AANKPDQAVQVLLASRERLKAQDAA-------TGKSEVNMQDVDPIQVELLLGKAYSDWG 159
           AA KPD+AVQVLLASRERL  + ++       +G  E   Q+VDP+QVELLLGKAYSDWG
Sbjct: 295 AAKKPDEAVQVLLASRERLNKEKSSNLNIKSDSGTKETESQEVDPVQVELLLGKAYSDWG 354

Query: 160 HVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAESMFIQARFF 306
           H+SDAVS+YDQLIS HP DFRGYLAKGIILK+NG +G+AE MFIQARFF
Sbjct: 355 HISDAVSLYDQLISSHPEDFRGYLAKGIILKENGNIGDAERMFIQARFF 403


>ref|XP_002513307.1| conserved hypothetical protein [Ricinus communis]
           gi|223547215|gb|EEF48710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 348

 Score =  151 bits (382), Expect = 5e-35
 Identities = 78/107 (72%), Positives = 86/107 (80%), Gaps = 7/107 (6%)
 Frame = +1

Query: 1   AANKPDQAVQVLLASRERLKAQDAA-------TGKSEVNMQDVDPIQVELLLGKAYSDWG 159
           AANKPD+AVQVLLASRERL ++ +        T   E   Q VDPIQV+LLLGKAYSDWG
Sbjct: 233 AANKPDEAVQVLLASRERLNSKKSGDVDVKGDTNAMETESQKVDPIQVDLLLGKAYSDWG 292

Query: 160 HVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAESMFIQAR 300
           HVSDAVSVYDQLIS HPNDFRGYLAKGIILK+NG VG+AE MFIQ +
Sbjct: 293 HVSDAVSVYDQLISSHPNDFRGYLAKGIILKENGNVGDAERMFIQLK 339


>ref|XP_002310923.1| predicted protein [Populus trichocarpa] gi|222850743|gb|EEE88290.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  151 bits (381), Expect = 6e-35
 Identities = 77/109 (70%), Positives = 89/109 (81%), Gaps = 7/109 (6%)
 Frame = +1

Query: 1   AANKPDQAVQVLLASRERLKAQDAAT-------GKSEVNMQDVDPIQVELLLGKAYSDWG 159
           AA KPD+AVQVLLASR +L +  +++          E+  Q+VDPIQV+LLLGKAYSDWG
Sbjct: 212 AAKKPDEAVQVLLASRAKLNSGKSSSVDIKVDGNGMEIESQEVDPIQVDLLLGKAYSDWG 271

Query: 160 HVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAESMFIQARFF 306
           HVSDAVSVYDQLIS HP+DFRGYLAKGIILK+NG VG+AE MFIQARFF
Sbjct: 272 HVSDAVSVYDQLISSHPDDFRGYLAKGIILKENGNVGDAERMFIQARFF 320


>gb|ABK95143.1| unknown [Populus trichocarpa]
          Length = 405

 Score =  151 bits (381), Expect = 6e-35
 Identities = 77/109 (70%), Positives = 89/109 (81%), Gaps = 7/109 (6%)
 Frame = +1

Query: 1   AANKPDQAVQVLLASRERLKAQDAAT-------GKSEVNMQDVDPIQVELLLGKAYSDWG 159
           AA KPD+AVQVLLASR +L +  +++          E+  Q+VDPIQV+LLLGKAYSDWG
Sbjct: 282 AAKKPDEAVQVLLASRAKLNSGKSSSVDIKVDGNGMEIESQEVDPIQVDLLLGKAYSDWG 341

Query: 160 HVSDAVSVYDQLISIHPNDFRGYLAKGIILKQNGKVGEAESMFIQARFF 306
           HVSDAVSVYDQLIS HP+DFRGYLAKGIILK+NG VG+AE MFIQARFF
Sbjct: 342 HVSDAVSVYDQLISSHPDDFRGYLAKGIILKENGNVGDAERMFIQARFF 390


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