BLASTX nr result

ID: Coptis23_contig00024506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024506
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266270.2| PREDICTED: tRNA-specific adenosine deaminase...   190   1e-64
emb|CBI16992.3| unnamed protein product [Vitis vinifera]              190   1e-64
ref|XP_002521753.1| hydrolase, putative [Ricinus communis] gi|22...   173   1e-61
ref|XP_003630760.1| tRNA-specific adenosine deaminase-like prote...   159   5e-52
ref|XP_002889448.1| hydrolase/ zinc ion binding protein [Arabido...   149   2e-49

>ref|XP_002266270.2| PREDICTED: tRNA-specific adenosine deaminase-like protein 3-like
           [Vitis vinifera]
          Length = 433

 Score =  190 bits (483), Expect(2) = 1e-64
 Identities = 87/133 (65%), Positives = 108/133 (81%)
 Frame = -2

Query: 607 QNKKWEIIHIPEKPPISITEPPCVNVFAAIIEPKCASTLIRRLNQIAPLKNLFHVKRARK 428
           +  KWEIIHIPEKPP+S T  P V+V A++I+PK A+TL+RRLNQIAPL+N  HVKR +K
Sbjct: 2   ERAKWEIIHIPEKPPVSPTHQPTVDVLASVIDPKLANTLVRRLNQIAPLENFRHVKRIQK 61

Query: 427 TSVDGGKVQLSMILCVACEDVQQLESIPNDILELVNAYQLSPFTAKVPKYAASSKEEWKE 248
             + GGK QL++ILC+A E+   L+ IPND+LEL+N+YQLS F  KV KYAA SKEEW+E
Sbjct: 62  KHMQGGKTQLAIILCLASENENPLDGIPNDVLELINSYQLSAFITKVCKYAALSKEEWEE 121

Query: 247 QCKLWPTSYHPPS 209
           QCKLWPTSYHPP+
Sbjct: 122 QCKLWPTSYHPPT 134



 Score = 82.4 bits (202), Expect(2) = 1e-64
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -1

Query: 221 PSTLNIEGITGFSEEDSQSIFNYMKLALELTKA-TSQVTNAAVIVDPSVRKIISSGSDQT 45
           P T NIEGI GFSEEDSQS+F++MK A++L K+   QV NAAVIVDP V++II S  D+ 
Sbjct: 132 PPTYNIEGIAGFSEEDSQSVFSFMKSAVKLAKSDDGQVVNAAVIVDPLVKQIIVSACDEI 191

Query: 44  HSWLGPTNNTSLE 6
            SW  P + TS+E
Sbjct: 192 CSWHTPMDKTSVE 204


>emb|CBI16992.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  190 bits (483), Expect(2) = 1e-64
 Identities = 87/133 (65%), Positives = 108/133 (81%)
 Frame = -2

Query: 607 QNKKWEIIHIPEKPPISITEPPCVNVFAAIIEPKCASTLIRRLNQIAPLKNLFHVKRARK 428
           +  KWEIIHIPEKPP+S T  P V+V A++I+PK A+TL+RRLNQIAPL+N  HVKR +K
Sbjct: 2   ERAKWEIIHIPEKPPVSPTHQPTVDVLASVIDPKLANTLVRRLNQIAPLENFRHVKRIQK 61

Query: 427 TSVDGGKVQLSMILCVACEDVQQLESIPNDILELVNAYQLSPFTAKVPKYAASSKEEWKE 248
             + GGK QL++ILC+A E+   L+ IPND+LEL+N+YQLS F  KV KYAA SKEEW+E
Sbjct: 62  KHMQGGKTQLAIILCLASENENPLDGIPNDVLELINSYQLSAFITKVCKYAALSKEEWEE 121

Query: 247 QCKLWPTSYHPPS 209
           QCKLWPTSYHPP+
Sbjct: 122 QCKLWPTSYHPPT 134



 Score = 82.4 bits (202), Expect(2) = 1e-64
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -1

Query: 221 PSTLNIEGITGFSEEDSQSIFNYMKLALELTKA-TSQVTNAAVIVDPSVRKIISSGSDQT 45
           P T NIEGI GFSEEDSQS+F++MK A++L K+   QV NAAVIVDP V++II S  D+ 
Sbjct: 132 PPTYNIEGIAGFSEEDSQSVFSFMKSAVKLAKSDDGQVVNAAVIVDPLVKQIIVSACDEI 191

Query: 44  HSWLGPTNNTSLE 6
            SW  P + TS+E
Sbjct: 192 CSWHTPMDKTSVE 204


>ref|XP_002521753.1| hydrolase, putative [Ricinus communis] gi|223538966|gb|EEF40563.1|
           hydrolase, putative [Ricinus communis]
          Length = 423

 Score =  173 bits (439), Expect(2) = 1e-61
 Identities = 79/133 (59%), Positives = 108/133 (81%)
 Frame = -2

Query: 607 QNKKWEIIHIPEKPPISITEPPCVNVFAAIIEPKCASTLIRRLNQIAPLKNLFHVKRARK 428
           + ++W+I+HIPEKPPI   + P VN FA++IEPK A+TLIR+LN+I+PL+NL HVKR +K
Sbjct: 4   KTEEWQIVHIPEKPPIPPNQQPTVNAFASLIEPKVANTLIRQLNKISPLENLRHVKRIQK 63

Query: 427 TSVDGGKVQLSMILCVACEDVQQLESIPNDILELVNAYQLSPFTAKVPKYAASSKEEWKE 248
            +V+G K QLS+ILC+A ED  Q  ++  D+ EL+N+YQLSPF  K+ KYAA+S+EEW+E
Sbjct: 64  RNVEG-KNQLSVILCLASEDDNQSNNMRQDVQELINSYQLSPFITKICKYAATSREEWEE 122

Query: 247 QCKLWPTSYHPPS 209
           QCK WPTS+HPP+
Sbjct: 123 QCKFWPTSFHPPT 135



 Score = 89.4 bits (220), Expect(2) = 1e-61
 Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -1

Query: 221 PSTLNIEGITGFSEEDSQSIFNYMKLALELTKA-TSQVTNAAVIVDPSVRKIISSGSDQT 45
           P T NI+GI GF EEDSQS+FN+MK+A++L K+    V NAAVIVDPSV++II+SG D+ 
Sbjct: 133 PPTYNIDGIAGFDEEDSQSVFNFMKVAIDLAKSGDGSVVNAAVIVDPSVQQIIASGCDKI 192

Query: 44  HSWLGPTNNTSLE 6
            SW  PTNN+  E
Sbjct: 193 FSWHVPTNNSHTE 205


>ref|XP_003630760.1| tRNA-specific adenosine deaminase-like protein [Medicago
           truncatula] gi|355524782|gb|AET05236.1| tRNA-specific
           adenosine deaminase-like protein [Medicago truncatula]
          Length = 424

 Score =  159 bits (402), Expect(2) = 5e-52
 Identities = 72/125 (57%), Positives = 98/125 (78%)
 Frame = -2

Query: 589 IIHIPEKPPISITEPPCVNVFAAIIEPKCASTLIRRLNQIAPLKNLFHVKRARKTSVDGG 410
           I+HIP++ P  +   P V+VFA+ I+PK A+ ++RRLNQIAPL+NL HVKR +K  ++GG
Sbjct: 7   IVHIPDEEPHDLHNQPTVSVFASSIDPKHANQIVRRLNQIAPLENLRHVKRIQKKVLEGG 66

Query: 409 KVQLSMILCVACEDVQQLESIPNDILELVNAYQLSPFTAKVPKYAASSKEEWKEQCKLWP 230
           ++QLS++LC+A E   QL  +P+ + EL+N+YQLSPF  KV KY A+SKEEW+EQCK WP
Sbjct: 67  QIQLSVVLCLAYEGGDQLYGVPSHLQELINSYQLSPFITKVCKYEATSKEEWQEQCKFWP 126

Query: 229 TSYHP 215
           TSYHP
Sbjct: 127 TSYHP 131



 Score = 71.2 bits (173), Expect(2) = 5e-52
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -1

Query: 221 PSTLNIEGITGFSEEDSQSIFNYMKLALELTKATSQVTNAAVIVDPSVRKIISSGSDQTH 42
           P T +IEGITGFS+EDSQS+  +M+ A+EL  +   V NAAVIVDPS ++I+S+  D   
Sbjct: 131 PRTYSIEGITGFSKEDSQSVLKFMQSAVELATSDGLVVNAAVIVDPSAKQIVSTARDLVF 190

Query: 41  SW 36
           +W
Sbjct: 191 AW 192


>ref|XP_002889448.1| hydrolase/ zinc ion binding protein [Arabidopsis lyrata subsp.
           lyrata] gi|297335290|gb|EFH65707.1| hydrolase/ zinc ion
           binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score =  149 bits (377), Expect(2) = 2e-49
 Identities = 71/130 (54%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
 Frame = -2

Query: 595 WEIIHIPEKPPISITEPPCVNVFAAIIEPKCASTLIRRLNQIAPLKNLFHVKRARKTSV- 419
           WEIIHIPEKP +S    P V V+A++I+PK A+ ++R L +IAPL++L HVKR +K  + 
Sbjct: 6   WEIIHIPEKPALSPDHQPTVKVYASLIKPKFANMIVRHLCKIAPLEDLRHVKRVKKKILP 65

Query: 418 DGGKVQLSMILCVACEDVQQLESIPNDILELVNAYQLSPFTAKVPKYAASSKEEWKEQCK 239
           D G+ QL++ILC+A E   QL ++P D+ +LV+ Y+LSPF  +V KYAA SKEEW+EQ K
Sbjct: 66  DSGETQLTVILCLAPEHHDQLNNMPPDVQKLVDPYELSPFITQVCKYAAVSKEEWEEQSK 125

Query: 238 LWPTSYHPPS 209
           +WPTS+HPP+
Sbjct: 126 IWPTSFHPPT 135



 Score = 72.4 bits (176), Expect(2) = 2e-49
 Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -1

Query: 221 PSTLNIEGITGFSEEDSQSIFNYMKLALELTKATSQ-VTNAAVIVDPSVRKIISSGSDQT 45
           P T NI+GI GFSEED+QSI  +M++ +++  +  + + NAAVIVDPSVR+II+S +DQ 
Sbjct: 133 PPTYNIDGIGGFSEEDTQSICKFMRVVIDMAVSGHKPLVNAAVIVDPSVRRIIASETDQV 192

Query: 44  HSWLGPTNNTSLET 3
           ++   P +NTS  T
Sbjct: 193 YASSAPRDNTSAGT 206


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