BLASTX nr result
ID: Coptis23_contig00024503
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00024503
(1819 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat... 630 e-178
emb|CBI28440.3| unnamed protein product [Vitis vinifera] 630 e-178
emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera] 629 e-177
ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|2... 605 e-171
ref|XP_002525089.1| conserved hypothetical protein [Ricinus comm... 594 e-167
>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 630 bits (1626), Expect = e-178
Identities = 307/544 (56%), Positives = 404/544 (74%), Gaps = 17/544 (3%)
Frame = +1
Query: 1 VGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCSVRHIMKVL 180
V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G V I++VL
Sbjct: 1186 VDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVRVL 1245
Query: 181 QLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICKTVRETDPE 330
+ +KG PG LPFI++DVRNF+++CKK R ND ELL+ CK + E DP+
Sbjct: 1246 ETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLETCKALSERDPD 1305
Query: 331 FLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVWFGIDNNGK 510
F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+Y LLGVWFGIDN+GK
Sbjct: 1306 FVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSITYGLLLGVWFGIDNHGK 1365
Query: 511 PIFFGCVLLREETAQSYAWALQAFLRFMQRRYPQTILTDLDLVLKDAISNSMPYTKHVTC 690
IFFGCVLL++ET+QS+AWALQ F+RFM+ R PQTILTD+D L+DAI++ +P TKHV C
Sbjct: 1366 AIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGLRDAITSELPNTKHVIC 1425
Query: 691 IWHIVSKLWSWFSFPLGTRFEEFKSEFERLYYLDTKKDFECQWNQMVTRFAFGSNKHISL 870
+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+ +V +F S+KHI L
Sbjct: 1426 LWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWHHLVAQFGLVSDKHIGL 1485
Query: 871 LFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTSLESFFQQVGIVANYRNQ 1050
LFS+R W S IRG FLA M ++EY +S+D F KRIL +QT L++FF+QVG+ A++ NQ
Sbjct: 1486 LFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILSAQTCLQAFFEQVGVAASWANQ 1545
Query: 1051 SRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQHEIVLSMQCAAIETANGSYVVRHHKK 1230
+R E ++ +HIKT MPIEEHA SILTPYAF++LQHEIVLSMQ A E ANGSY+VRH+K
Sbjct: 1546 TR-ENMQYMHIKTCMPIEEHAQSILTPYAFNVLQHEIVLSMQYATREMANGSYLVRHYKT 1604
Query: 1231 LDGGCLVSWIPKDEKICCSCREIEVSGILCRHALRVLALKNYFHLPEKYLPIRWRRECLS 1410
+DGGCLV W+P++E+I CSC+E E SG+LCRH+LR+L +KNYF LP+KY P+RWR+E
Sbjct: 1605 VDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVKNYFQLPDKYFPLRWRKESSL 1664
Query: 1411 I-------QTNSNDWXXXXXXXXXXXXAESSLTKVRIDYVHQELIRIINNVKAMPPSDGV 1569
I Q+NS++ ES ++K R +YVH+EL ++++V+ MP D V
Sbjct: 1665 ITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYVHKELTGLLDHVRNMPVVDEV 1724
Query: 1570 IFNL 1581
N+
Sbjct: 1725 SLNM 1728
>emb|CBI28440.3| unnamed protein product [Vitis vinifera]
Length = 1355
Score = 630 bits (1626), Expect = e-178
Identities = 307/544 (56%), Positives = 404/544 (74%), Gaps = 17/544 (3%)
Frame = +1
Query: 1 VGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCSVRHIMKVL 180
V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G V I++VL
Sbjct: 142 VDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVRVL 201
Query: 181 QLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICKTVRETDPE 330
+ +KG PG LPFI++DVRNF+++CKK R ND ELL+ CK + E DP+
Sbjct: 202 ETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLETCKALSERDPD 261
Query: 331 FLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVWFGIDNNGK 510
F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+Y LLGVWFGIDN+GK
Sbjct: 262 FVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSITYGLLLGVWFGIDNHGK 321
Query: 511 PIFFGCVLLREETAQSYAWALQAFLRFMQRRYPQTILTDLDLVLKDAISNSMPYTKHVTC 690
IFFGCVLL++ET+QS+AWALQ F+RFM+ R PQTILTD+D L+DAI++ +P TKHV C
Sbjct: 322 AIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGLRDAITSELPNTKHVIC 381
Query: 691 IWHIVSKLWSWFSFPLGTRFEEFKSEFERLYYLDTKKDFECQWNQMVTRFAFGSNKHISL 870
+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+ +V +F S+KHI L
Sbjct: 382 LWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWHHLVAQFGLVSDKHIGL 441
Query: 871 LFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTSLESFFQQVGIVANYRNQ 1050
LFS+R W S IRG FLA M ++EY +S+D F KRIL +QT L++FF+QVG+ A++ NQ
Sbjct: 442 LFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILSAQTCLQAFFEQVGVAASWANQ 501
Query: 1051 SRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQHEIVLSMQCAAIETANGSYVVRHHKK 1230
+R E ++ +HIKT MPIEEHA SILTPYAF++LQHEIVLSMQ A E ANGSY+VRH+K
Sbjct: 502 TR-ENMQYMHIKTCMPIEEHAQSILTPYAFNVLQHEIVLSMQYATREMANGSYLVRHYKT 560
Query: 1231 LDGGCLVSWIPKDEKICCSCREIEVSGILCRHALRVLALKNYFHLPEKYLPIRWRRECLS 1410
+DGGCLV W+P++E+I CSC+E E SG+LCRH+LR+L +KNYF LP+KY P+RWR+E
Sbjct: 561 VDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVKNYFQLPDKYFPLRWRKESSL 620
Query: 1411 I-------QTNSNDWXXXXXXXXXXXXAESSLTKVRIDYVHQELIRIINNVKAMPPSDGV 1569
I Q+NS++ ES ++K R +YVH+EL ++++V+ MP D V
Sbjct: 621 ITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYVHKELTGLLDHVRNMPVVDEV 680
Query: 1570 IFNL 1581
N+
Sbjct: 681 SLNM 684
>emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]
Length = 692
Score = 629 bits (1621), Expect = e-177
Identities = 306/544 (56%), Positives = 403/544 (74%), Gaps = 17/544 (3%)
Frame = +1
Query: 1 VGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCSVRHIMKVL 180
V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G V I++VL
Sbjct: 142 VDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVRVL 201
Query: 181 QLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICKTVRETDPE 330
+ +KG PG LPFI++DVRNF+++CKK R ND ELL+ CK + E DP+
Sbjct: 202 ETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLETCKALSERDPD 261
Query: 331 FLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVWFGIDNNGK 510
F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+Y LLGVWFGIDN+GK
Sbjct: 262 FVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSITYGLLLGVWFGIDNHGK 321
Query: 511 PIFFGCVLLREETAQSYAWALQAFLRFMQRRYPQTILTDLDLVLKDAISNSMPYTKHVTC 690
IFFGCVLL++ET+QS+AWALQ F+RFM+ R PQTILTD+D L+DAI++ +P TKHV C
Sbjct: 322 AIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGLRDAITSELPNTKHVIC 381
Query: 691 IWHIVSKLWSWFSFPLGTRFEEFKSEFERLYYLDTKKDFECQWNQMVTRFAFGSNKHISL 870
+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+ +V +F S+KHI L
Sbjct: 382 LWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWHHLVAQFGLVSDKHIGL 441
Query: 871 LFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTSLESFFQQVGIVANYRNQ 1050
LFS+R W S IRG FLA M ++EY +S+D F KRIL +QT L++FF+QVG+ A++ NQ
Sbjct: 442 LFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILSAQTCLQAFFEQVGVAASWANQ 501
Query: 1051 SRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQHEIVLSMQCAAIETANGSYVVRHHKK 1230
+R E ++ +H KT MPIEEHA SILTPYAF++LQHEIVLSMQ A E ANGSY+VRH+K
Sbjct: 502 TR-ENMQYMHXKTCMPIEEHAQSILTPYAFNVLQHEIVLSMQYATREMANGSYLVRHYKT 560
Query: 1231 LDGGCLVSWIPKDEKICCSCREIEVSGILCRHALRVLALKNYFHLPEKYLPIRWRRECLS 1410
+DGGCLV W+P++E+I CSC+E E SG+LCRH+LR+L +KNYF LP+KY P+RWR+E
Sbjct: 561 VDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVKNYFQLPDKYFPLRWRKESSL 620
Query: 1411 I-------QTNSNDWXXXXXXXXXXXXAESSLTKVRIDYVHQELIRIINNVKAMPPSDGV 1569
I Q+NS++ ES ++K R +YVH+EL ++++V+ MP D V
Sbjct: 621 ITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYVHKELTGLLDHVRNMPVIDEV 680
Query: 1570 IFNL 1581
N+
Sbjct: 681 SLNM 684
>ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|222861970|gb|EEE99512.1|
predicted protein [Populus trichocarpa]
Length = 686
Score = 605 bits (1561), Expect = e-171
Identities = 293/549 (53%), Positives = 400/549 (72%), Gaps = 17/549 (3%)
Frame = +1
Query: 1 VGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCSVRHIMKVL 180
V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G + I+KVL
Sbjct: 136 VDGLAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPINRIVKVL 195
Query: 181 QLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICKTVRETDPE 330
+L+KG PG+ PFI++DVRNF+++CKK R ND ELL+ CK+V E DP+
Sbjct: 196 ELEKGVQPGHFPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACKSVAERDPD 255
Query: 331 FLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVWFGIDNNGK 510
F +DYT DEN K+ENI W YG+SVRAY L+GDVV FD TYR I+Y LLGVWFG+DN+GK
Sbjct: 256 FAYDYTTDENQKVENIAWLYGDSVRAYTLYGDVVTFDTTYRSITYGLLLGVWFGMDNHGK 315
Query: 511 PIFFGCVLLREETAQSYAWALQAFLRFMQRRYPQTILTDLDLVLKDAISNSMPYTKHVTC 690
I +GCVLL++E++ S+ WALQ F+RF++ R+PQTI+TD++L L+DAI+ +P TKHV C
Sbjct: 316 AILYGCVLLQDESSHSFTWALQTFVRFIKGRHPQTIITDMELALRDAIARELPNTKHVVC 375
Query: 691 IWHIVSKLWSWFSFPLGTRFEEFKSEFERLYYLDTKKDFECQWNQMVTRFAFGSNKHISL 870
IWHI+SKL SW SFPLG+RFE+FK+EF+ L + + +DFE QWN +V RF ++KH++L
Sbjct: 376 IWHILSKLSSWLSFPLGSRFEDFKAEFDLLCHEENVEDFEHQWNLLVARFELVTDKHMAL 435
Query: 871 LFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTSLESFFQQVGIVANYRNQ 1050
LFS+R W++SYIRGSFLA + E+ QS+ FLKRIL QT L++ F+Q+G+ A NQ
Sbjct: 436 LFSYRGFWSISYIRGSFLARTMAPEFSQSLHTFLKRILGGQTCLQASFEQIGLAATVGNQ 495
Query: 1051 SRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQHEIVLSMQCAAIETANGSYVVRHHKK 1230
+RD +HIKT +PIEEHA S+LTPYAF++LQHEIVLS+Q A E A+GSY+V+H KK
Sbjct: 496 TRDG-TPYMHIKTCLPIEEHARSVLTPYAFNVLQHEIVLSLQYAIQEMADGSYLVQHIKK 554
Query: 1231 LDGGCLVSWIPKDEKICCSCREIEVSGILCRHALRVLALKNYFHLPEKYLPIRWRRECLS 1410
+DG V+W+P+DE+I CSC+E E SGILCRH+LR+L +KNYF LPE+Y P+RWRR+
Sbjct: 555 MDGERFVNWMPEDEQIHCSCKEFEHSGILCRHSLRLLEVKNYFQLPERYFPLRWRRDQSL 614
Query: 1411 I-------QTNSNDWXXXXXXXXXXXXAESSLTKVRIDYVHQELIRIINNVKAMPPSDGV 1569
+ Q+N+++ ES ++K R ++V +E+ ++ V++MP ++ +
Sbjct: 615 VPMDDQNAQSNNDECAQAFHALAEALLTESLISKERFNHVQREITGLLAEVRSMPVAEEL 674
Query: 1570 IFNLEAIPP 1596
N IPP
Sbjct: 675 SLN---IPP 680
>ref|XP_002525089.1| conserved hypothetical protein [Ricinus communis]
gi|223535670|gb|EEF37336.1| conserved hypothetical
protein [Ricinus communis]
Length = 656
Score = 594 bits (1531), Expect = e-167
Identities = 295/552 (53%), Positives = 390/552 (70%), Gaps = 21/552 (3%)
Frame = +1
Query: 1 VGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCSVRHIMKVL 180
V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G + I+KVL
Sbjct: 104 VDGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKVL 163
Query: 181 QLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICKTVRETDPE 330
+L+KG G LPF++RDVRNF+Q+ KKI R ND ELL+ CK +E D E
Sbjct: 164 ELEKGIQGGQLPFLERDVRNFVQNRKKIVQETDALLTEKRENDAMELLEACKAAKEVDEE 223
Query: 331 FLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVWFGIDNNGK 510
F+++YT+DE+ K+EN+ WSYG+SV AY LFGDVV FD +YR I+Y L G W GI+NNGK
Sbjct: 224 FVYEYTVDEHDKVENVAWSYGDSVCAYALFGDVVYFDTSYRSITYGMLFGAWLGIENNGK 283
Query: 511 PIFFGCVLLREETAQSYAWALQAFLRFMQRRYPQTILTDLDLVLKDAISNSMPYTKHVTC 690
+FFGCVLL++ET S+ WALQAF+RFM+ + P+TIL+DLD+ LKDAIS+ +P TKHV
Sbjct: 284 IVFFGCVLLQDETPHSFVWALQAFIRFMKGKCPETILSDLDMGLKDAISSELPSTKHVIS 343
Query: 691 IWHIVSKLWSWFSFPLGTRFEEFKSEFERLYYLDTKKDFECQWNQMVTRFAFGSNKHISL 870
+W+I+ K++SWFS PLGT++ EFKS+F+ LY ++ ++FE +W+QMV+ F GS+KHI+L
Sbjct: 344 MWNILPKVYSWFSLPLGTQYGEFKSKFDELYQIERTEEFELRWSQMVSMFGLGSDKHIAL 403
Query: 871 LFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTSLESFFQQVGIVANYRNQ 1050
L S R WA+SY+RG FLA M ++ Y +S+DAFLK + +QT L SFF+Q+GI AN+ NQ
Sbjct: 404 LNSLRASWALSYVRGYFLARMATSTYSKSVDAFLKGVCSAQTCLRSFFEQIGISANFLNQ 463
Query: 1051 SRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQHEIVLSMQCAAIETANGSYVVRHHKK 1230
+ E ++ + +KT +P+E HA ILTP+AFS LQHE+VL+MQ A E A+GSY+V H KK
Sbjct: 464 THRE-MQYMLMKTCIPVEGHAHGILTPFAFSALQHELVLAMQYALSEMADGSYLVNHFKK 522
Query: 1231 LDGGCLVSWIPKDEKICCSCREIEVSGILCRHALRVLALKNYFHLPEKYLPIRWRRECLS 1410
+DG V WIP+DE+I CSC+E E SGILCRHALRV KNYF LPEKY RWR++C
Sbjct: 523 MDGEHFVIWIPEDEQIHCSCKEFESSGILCRHALRVFIQKNYFQLPEKYYLSRWRQDCSL 582
Query: 1411 I-------QTNSNDWXXXXXXXXXXXXAESSLTKVRIDYVH----QELIRIINNVKAMPP 1557
+ Q+N W ESS+TK R D+VH +EL R++ V+ M
Sbjct: 583 VFYDEQLTQSNDGVWLQEYHSLTETLFRESSITKERFDFVHRELPKELTRLLGEVRQMLE 642
Query: 1558 SDGVIFNLEAIP 1593
SDGV NL P
Sbjct: 643 SDGVAMNLTLSP 654