BLASTX nr result

ID: Coptis23_contig00024488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024488
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH63242.1| hypothetical protein [Rheum australe]                  167   6e-40
ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266...   165   3e-39
ref|XP_002310156.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
emb|CAM84244.1| hypothetical protein [Populus tremula]                165   3e-39
emb|CAM84247.1| hypothetical protein [Populus tremula]                165   3e-39

>gb|ACH63242.1| hypothetical protein [Rheum australe]
          Length = 606

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/102 (78%), Positives = 91/102 (89%)
 Frame = -2

Query: 441 SWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAKDLESLL 262
           SWSSPAVRVYTASQVENELE AK +YL A+VGIS + KL+IPK++DWYLLDFAKDLESLL
Sbjct: 498 SWSSPAVRVYTASQVENELEVAKREYLHASVGISRTRKLMIPKVMDWYLLDFAKDLESLL 557

Query: 261 DWICLQLPDDMRNEAIRCLERGKGEFLSQSVQVVPYEFAFRY 136
           DWICLQLP ++R EAI+CLERGK E LSQ VQV+ YEF+FRY
Sbjct: 558 DWICLQLPVELRKEAIKCLERGKDESLSQRVQVMSYEFSFRY 599


>ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266128 [Vitis vinifera]
           gi|302142367|emb|CBI19570.3| unnamed protein product
           [Vitis vinifera]
          Length = 573

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/102 (77%), Positives = 87/102 (85%)
 Frame = -2

Query: 441 SWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAKDLESLL 262
           SWSSPAVRVYTASQVENELE AK +YLQAAVGIS++    IPKLLDWYLLDFAKD ES L
Sbjct: 467 SWSSPAVRVYTASQVENELEVAKREYLQAAVGISTTKLFAIPKLLDWYLLDFAKDFESFL 526

Query: 261 DWICLQLPDDMRNEAIRCLERGKGEFLSQSVQVVPYEFAFRY 136
           DWICLQLP ++  EAI+CLERG  E LSQ VQV+PYEF+FRY
Sbjct: 527 DWICLQLPSELGKEAIKCLERGNSEPLSQFVQVIPYEFSFRY 568


>ref|XP_002310156.1| predicted protein [Populus trichocarpa] gi|222853059|gb|EEE90606.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/101 (77%), Positives = 91/101 (90%)
 Frame = -2

Query: 441 SWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAKDLESLL 262
           SWSSPAVRVYTAS+VE ELE AK DYLQA VGIS +NKL+IPKLLDWYLLDFAKD+ESLL
Sbjct: 469 SWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLL 528

Query: 261 DWICLQLPDDMRNEAIRCLERGKGEFLSQSVQVVPYEFAFR 139
           DWICLQLP+++RNEA++CLER   + LSQ VQV+PY+F+FR
Sbjct: 529 DWICLQLPNELRNEAVKCLERRGRDPLSQIVQVMPYDFSFR 569


>emb|CAM84244.1| hypothetical protein [Populus tremula]
          Length = 570

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/101 (77%), Positives = 91/101 (90%)
 Frame = -2

Query: 441 SWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAKDLESLL 262
           SWSSPAVRVYTAS+VE ELE AK DYLQA VGIS +NKL+IPKLLDWYLLDFAKD+ESLL
Sbjct: 465 SWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLL 524

Query: 261 DWICLQLPDDMRNEAIRCLERGKGEFLSQSVQVVPYEFAFR 139
           DWICLQLP+++RNEA++CLER   + LSQ VQV+PY+F+FR
Sbjct: 525 DWICLQLPNELRNEAVKCLERRGRDPLSQIVQVMPYDFSFR 565


>emb|CAM84247.1| hypothetical protein [Populus tremula]
          Length = 570

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/101 (77%), Positives = 91/101 (90%)
 Frame = -2

Query: 441 SWSSPAVRVYTASQVENELEAAKNDYLQAAVGISSSNKLVIPKLLDWYLLDFAKDLESLL 262
           SWSSPAVRVYTAS+VE ELE AK DYLQA VGIS +NKL+IPKLLDWYLLDFAKD+ESLL
Sbjct: 465 SWSSPAVRVYTASRVEEELEVAKRDYLQATVGISRTNKLIIPKLLDWYLLDFAKDMESLL 524

Query: 261 DWICLQLPDDMRNEAIRCLERGKGEFLSQSVQVVPYEFAFR 139
           DWICLQLP+++RNEA++CLER   + LSQ VQV+PY+F+FR
Sbjct: 525 DWICLQLPNELRNEAVKCLERRGRDPLSQIVQVMPYDFSFR 565


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