BLASTX nr result

ID: Coptis23_contig00024466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024466
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera] ...   170   2e-40
ref|XP_003638051.1| Dolichol kinase [Medicago truncatula] gi|355...   165   7e-39
ref|XP_002313531.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38
ref|NP_190090.2| dolichol kinase [Arabidopsis thaliana] gi|33264...   154   2e-35
emb|CAB89319.1| putative protein [Arabidopsis thaliana]               154   2e-35

>ref|XP_002273662.1| PREDICTED: dolichol kinase [Vitis vinifera]
           gi|297734932|emb|CBI17166.3| unnamed protein product
           [Vitis vinifera]
          Length = 564

 Score =  170 bits (431), Expect = 2e-40
 Identities = 110/230 (47%), Positives = 137/230 (59%), Gaps = 21/230 (9%)
 Frame = +3

Query: 51  SSSVLLNGERGVVFVFITRVLFSVPIXXXXXXXXXXXXXFAGLFVEIFLENSKSH--FKT 224
           +S  L NGER VV +FI+ +LFS P               A LF++I L+NS     FKT
Sbjct: 2   ASQSLCNGERAVVLLFISAILFSTPSSLFSQALVLFLLAIAALFLDIRLDNSNFSVPFKT 61

Query: 225 ------GILLGSVTLPTVMLSRLIQLSRPPVSPP---QDVGYLVVQYWVVSASCFSVLVF 377
                 GI LG+VTLP VM+SRLIQLSR         +++GYL VQYW  SASCF VL+F
Sbjct: 62  RPGASSGIFLGAVTLPAVMISRLIQLSRAFSLHEVGIKELGYLKVQYWATSASCFGVLIF 121

Query: 378 LTLALRHSVNRRI---------LGGLLSYVVVYTSLCFLSLA-TNGQGWEVVVLVKLLWI 527
           + L +R S N            L    S VV    LC +S A  +  G   V+L  LLW+
Sbjct: 122 IFLLMRRSPNNSCSFSSNSPQGLKFSSSCVVSCAVLCCVSFAIVSYYGLHTVLL--LLWV 179

Query: 528 FSHGLAAVKLIQHILSTFPSCASIGEALLVTAGIILYLGDMLAYTLLKIN 677
             HG+AAVKLIQH+ +TFPSCASIGEALLVT+G++LY GDML  T+ KI+
Sbjct: 180 LFHGVAAVKLIQHVHNTFPSCASIGEALLVTSGLVLYFGDMLGCTIAKID 229


>ref|XP_003638051.1| Dolichol kinase [Medicago truncatula] gi|355503986|gb|AES85189.1|
           Dolichol kinase [Medicago truncatula]
          Length = 554

 Score =  165 bits (418), Expect = 7e-39
 Identities = 98/215 (45%), Positives = 132/215 (61%), Gaps = 13/215 (6%)
 Frame = +3

Query: 69  NGERGVVFVFITRVLFSVPIXXXXXXXXXXXXXFAGLFVEIFLENSKSHFK--------T 224
           NGER +V  FI+ +L+S+P               A  F+EI +++S S F         +
Sbjct: 7   NGERLIVLFFISTILYSLPFSLLSHGVSLSLLAIASFFLEISVDSSVSPFSLRTRPGASS 66

Query: 225 GILLGSVTLPTVMLSRLIQLSRP---PVSPPQDVGYLVVQYWVVSASCFSVLVFLTLALR 395
           GILLG++TLP+++LS+LIQ SR        PQ++ YL +QYW  SAS FSVL+FL   ++
Sbjct: 67  GILLGAITLPSLILSKLIQSSRGFSLQQLQPQEIEYLTLQYWATSASVFSVLLFLAFTIK 126

Query: 396 HSVNRRILGGLLSYVVVYTS--LCFLSLATNGQGWEVVVLVKLLWIFSHGLAAVKLIQHI 569
           HS      G  LS+  V +   LC ++L T  Q   +   +KL W+F HGLA+VKLIQH 
Sbjct: 127 HSH----WGARLSFAFVLSQAVLCVVALLTTSQ-IGLHPALKLSWVFFHGLASVKLIQHF 181

Query: 570 LSTFPSCASIGEALLVTAGIILYLGDMLAYTLLKI 674
           + TFPSCASIGEA LVTAGI+LY GDML  T+ K+
Sbjct: 182 MRTFPSCASIGEAFLVTAGIVLYFGDMLLLTIKKL 216


>ref|XP_002313531.1| predicted protein [Populus trichocarpa] gi|222849939|gb|EEE87486.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  163 bits (413), Expect = 3e-38
 Identities = 104/225 (46%), Positives = 131/225 (58%), Gaps = 15/225 (6%)
 Frame = +3

Query: 42  AASSSSVLLNGERGVVFVFITRVLFSVPIXXXXXXXXXXXXXFAGLFVEIFLENSKS--H 215
           AA S S LLNGER VV +FI  VLFS+P+                L VE+ +E S S   
Sbjct: 2   AAVSFSQLLNGERAVVTLFIVIVLFSLPLSLLLHGVALSLLALFALSVEVRVETSTSLSQ 61

Query: 216 FKT------GILLGSVTLPTVMLSRLIQLSRP---PVSPPQDVGYLVVQYWVVSASCFSV 368
           FKT      G+LLG+VTLPT MLS+LIQ SR        P ++ YL +QYW    SCF+V
Sbjct: 62  FKTRAGASSGLLLGAVTLPTFMLSKLIQQSRAFSLNQVHPGELNYLALQYWAAFGSCFTV 121

Query: 369 LVFLTLALRHSVNRRILGGLLSYVV----VYTSLCFLSLATNGQGWEVVVLVKLLWIFSH 536
           L+ L L    +   R    L +  +     Y+ L FL +   G    +  + KLLW+F H
Sbjct: 122 LMVLCLLTLDNTRSRSFCHLTNKYLHAWNFYSPLLFLFILFAG----LHAIWKLLWVFFH 177

Query: 537 GLAAVKLIQHILSTFPSCASIGEALLVTAGIILYLGDMLAYTLLK 671
           G AAVKL+QH+L+TFPSC S GEALLVT G++LY GDMLAYT+ K
Sbjct: 178 GFAAVKLVQHLLNTFPSCVSFGEALLVTVGLVLYFGDMLAYTIEK 222


>ref|NP_190090.2| dolichol kinase [Arabidopsis thaliana] gi|332644461|gb|AEE77982.1|
           dolichol kinase [Arabidopsis thaliana]
          Length = 569

 Score =  154 bits (389), Expect = 2e-35
 Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 20/229 (8%)
 Frame = +3

Query: 48  SSSSVLLNGERGVVFVFITRVLFSVPIXXXXXXXXXXXXXFAGLFVEIFLENSK---SHF 218
           ++++  + GER VVFV ++R+L S+P+              +   VEI +E S    SHF
Sbjct: 3   TTATSFVTGERVVVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVETSPFLLSHF 62

Query: 219 KT------GILLGSVTLPTVMLSRLIQLSRP---PVSPPQDVGYLVVQYWVVSASCFSVL 371
            +      GILLG+VTLP+VM+S+L+QLSR      +   ++ ++ +QYW  SASC ++L
Sbjct: 63  SSRRGASSGILLGAVTLPSVMISKLVQLSRAISIHEAEQDELAHVTMQYWAASASCCAIL 122

Query: 372 VFLTLALRHSVNRRILGGL--------LSYVVVYTSLCFLSLATNGQGWEVVVLVKLLWI 527
           ++L++ +        L           L+  V+Y   CF+SL+       +   +K+LW+
Sbjct: 123 IYLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLSMISHTG-LNTSLKMLWM 181

Query: 528 FSHGLAAVKLIQHILSTFPSCASIGEALLVTAGIILYLGDMLAYTLLKI 674
             HGLAAVKLI+H+L TFPSCASIGEALLVT+G++LY GD LA T+ KI
Sbjct: 182 LFHGLAAVKLIRHLLCTFPSCASIGEALLVTSGLVLYFGDFLACTIAKI 230


>emb|CAB89319.1| putative protein [Arabidopsis thaliana]
          Length = 598

 Score =  154 bits (389), Expect = 2e-35
 Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 20/229 (8%)
 Frame = +3

Query: 48  SSSSVLLNGERGVVFVFITRVLFSVPIXXXXXXXXXXXXXFAGLFVEIFLENSK---SHF 218
           ++++  + GER VVFV ++R+L S+P+              +   VEI +E S    SHF
Sbjct: 3   TTATSFVTGERVVVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVETSPFLLSHF 62

Query: 219 KT------GILLGSVTLPTVMLSRLIQLSRP---PVSPPQDVGYLVVQYWVVSASCFSVL 371
            +      GILLG+VTLP+VM+S+L+QLSR      +   ++ ++ +QYW  SASC ++L
Sbjct: 63  SSRRGASSGILLGAVTLPSVMISKLVQLSRAISIHEAEQDELAHVTMQYWAASASCCAIL 122

Query: 372 VFLTLALRHSVNRRILGGL--------LSYVVVYTSLCFLSLATNGQGWEVVVLVKLLWI 527
           ++L++ +        L           L+  V+Y   CF+SL+       +   +K+LW+
Sbjct: 123 IYLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLSMISHTG-LNTSLKMLWM 181

Query: 528 FSHGLAAVKLIQHILSTFPSCASIGEALLVTAGIILYLGDMLAYTLLKI 674
             HGLAAVKLI+H+L TFPSCASIGEALLVT+G++LY GD LA T+ KI
Sbjct: 182 LFHGLAAVKLIRHLLCTFPSCASIGEALLVTSGLVLYFGDFLACTIAKI 230


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