BLASTX nr result

ID: Coptis23_contig00024446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024446
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16560.3| unnamed protein product [Vitis vinifera]              112   3e-23
emb|CAN77487.1| hypothetical protein VITISV_020248 [Vitis vinifera]   112   3e-23
ref|XP_002299096.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002523401.1| conserved hypothetical protein [Ricinus comm...    94   9e-18
ref|XP_002869615.1| predicted protein [Arabidopsis lyrata subsp....    88   8e-16

>emb|CBI16560.3| unnamed protein product [Vitis vinifera]
          Length = 772

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/80 (65%), Positives = 66/80 (82%)
 Frame = +1

Query: 1   VYFVTTVNPQGVKVEIWPRILIFTSRCKENSYYVTITPEKYSQWRYDFGEIVWSDGTHHV 180
           VYFV+ VNP GVKV IWPRIL F+   +E++YYVT+ P+K SQ RYDFGEIVW+DG H+V
Sbjct: 691 VYFVSIVNPCGVKVSIWPRILFFSCFKEEHTYYVTLKPQKKSQGRYDFGEIVWTDGFHYV 750

Query: 181 KSPLVVRVNNAGNVNDSSTH 240
           +SPLVV VNNAG+ +DS ++
Sbjct: 751 RSPLVVSVNNAGDSDDSLSY 770


>emb|CAN77487.1| hypothetical protein VITISV_020248 [Vitis vinifera]
          Length = 681

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/80 (65%), Positives = 66/80 (82%)
 Frame = +1

Query: 1   VYFVTTVNPQGVKVEIWPRILIFTSRCKENSYYVTITPEKYSQWRYDFGEIVWSDGTHHV 180
           VYFV+ VNP GVKV IWPRIL F+   +E++YYVT+ P+K SQ RYDFGEIVW+DG H+V
Sbjct: 600 VYFVSIVNPCGVKVSIWPRILFFSCFKEEHTYYVTLKPQKKSQGRYDFGEIVWTDGFHYV 659

Query: 181 KSPLVVRVNNAGNVNDSSTH 240
           +SPLVV VNNAG+ +DS ++
Sbjct: 660 RSPLVVSVNNAGDSDDSLSY 679


>ref|XP_002299096.1| predicted protein [Populus trichocarpa] gi|222846354|gb|EEE83901.1|
           predicted protein [Populus trichocarpa]
          Length = 791

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +1

Query: 1   VYFVTTVNPQGVKVEIWPRILIFTSRCKENSYYVTITPEKYSQWRYDFGEIVWSDGTHHV 180
           +YFV+ V P GV+V IWPRILIF+   +E SY+VT+ P K SQ RYDFGEIVWSDG H V
Sbjct: 697 IYFVSIVKPHGVEVLIWPRILIFSCFKEELSYFVTLKPLKKSQGRYDFGEIVWSDGFHKV 756

Query: 181 KSPLVVRVNNAGNVND 228
           +SPLVV VNN+ + +D
Sbjct: 757 RSPLVVLVNNSNDDDD 772


>ref|XP_002523401.1| conserved hypothetical protein [Ricinus communis]
           gi|223537351|gb|EEF38980.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 700

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/83 (59%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   VYFVTTVNPQGVKVEIWPRILIFTSRCKENSYYVTITPEKYSQWRYDFGEIVWSDGTHH- 177
           +YF + V P GV+V IWPR+L+F+   +E SYYVT+ P K SQ RYDFGEIVWSDG  H 
Sbjct: 617 IYFASIVKPNGVEVVIWPRLLVFSFFKEELSYYVTLNPMKKSQGRYDFGEIVWSDGLGHC 676

Query: 178 VKSPLVVRVNNAGNVNDSSTHLS 246
           V+SPLVV VN A   +D ST L+
Sbjct: 677 VRSPLVVMVNTA--AHDDSTGLA 697


>ref|XP_002869615.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315451|gb|EFH45874.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 744

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/71 (56%), Positives = 52/71 (73%)
 Frame = +1

Query: 1   VYFVTTVNPQGVKVEIWPRILIFTSRCKENSYYVTITPEKYSQWRYDFGEIVWSDGTHHV 180
           VYFV  + P GV+V IWPRIL+F+   +E+SYYVT  P +    RY FGEI+W+DG H V
Sbjct: 668 VYFVDIIRPMGVEVVIWPRILVFSKCQQEHSYYVTFKPTEIYSGRYVFGEIMWTDGLHRV 727

Query: 181 KSPLVVRVNNA 213
           +SPLVV ++NA
Sbjct: 728 RSPLVVFLSNA 738


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