BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024443
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544792.1| PREDICTED: synaptonemal complex protein 1-li...   135   1e-29
ref|XP_003543761.1| PREDICTED: synaptonemal complex protein 1-li...   135   1e-29
emb|CBI19158.3| unnamed protein product [Vitis vinifera]              135   2e-29
ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-li...   134   3e-29
ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|2...   124   3e-26

>ref|XP_003544792.1| PREDICTED: synaptonemal complex protein 1-like [Glycine max]
          Length = 866

 Score =  135 bits (340), Expect = 1e-29
 Identities = 78/162 (48%), Positives = 99/162 (61%), Gaps = 4/162 (2%)
 Frame = +2

Query: 35   NEEVRKKVIELQKGQEVLMVQLQKKTMLLRKDLEGQIRALRCQHEDECQKFQEQLECQKS 214
            NE++++  ++ +        +L++KTM +R D E QI+ALRC+ EDECQK +E+L  QKS
Sbjct: 644  NEQLKRTQLQAEN-------ELREKTMYMRNDHEAQIKALRCELEDECQKLEEELHLQKS 696

Query: 215  KEERQRALLQSQWKGMDGNPPEDQEVNSKKANFISSIKKRDSDGKNRNQSTIRPHKEGKM 394
            KE+RQRALLQ QWK M   P EDQEVNSK+   ISSIK+R S G  RNQ  +        
Sbjct: 697  KEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSFGGKRNQHDL-------- 748

Query: 395  TNKILESSPLLRATQTPVSNILKKVEKVDTGGV----KHSRK 508
                   SP + ATQ PV  +LKKVE V TG      KH RK
Sbjct: 749  ------DSPHIEATQRPVPKLLKKVENVKTGSAVSIPKHHRK 784


>ref|XP_003543761.1| PREDICTED: synaptonemal complex protein 1-like [Glycine max]
          Length = 866

 Score =  135 bits (340), Expect = 1e-29
 Identities = 77/162 (47%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
 Frame = +2

Query: 35   NEEVRKKVIELQKGQEVLMVQLQKKTMLLRKDLEGQIRALRCQHEDECQKFQEQLECQKS 214
            NE++++  ++ +        +L++KTM +R D E QI+ALRC+ EDEC+K +E+L  QKS
Sbjct: 644  NEQLKRTQLQAEN-------ELREKTMFMRNDHEAQIKALRCELEDECRKLEEELHLQKS 696

Query: 215  KEERQRALLQSQWKGMDGNPPEDQEVNSKKANFISSIKKRDSDGKNRNQSTIRPHKEGKM 394
            KE+RQRALLQ QWK M   P EDQEVNSK+   ISSIK+R S G  RNQ  +        
Sbjct: 697  KEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSFGGKRNQHDL-------- 748

Query: 395  TNKILESSPLLRATQTPVSNILKKVEKVDTGGV----KHSRK 508
                   SP + ATQTPV  +LKK+E V TG      KH RK
Sbjct: 749  ------DSPYIDATQTPVPKLLKKMENVKTGSAVSIPKHHRK 784


>emb|CBI19158.3| unnamed protein product [Vitis vinifera]
          Length = 876

 Score =  135 bits (339), Expect = 2e-29
 Identities = 85/173 (49%), Positives = 108/173 (62%), Gaps = 12/173 (6%)
 Frame = +2

Query: 26   RSENEEVRKKV-IELQKGQEVLMVQLQ------KKTMLLRKDLEGQIRALRCQHEDECQK 184
            R + E  RK++ ++    +E+  VQLQ      +KT+LLR + E QI+ LR QHEDEC+K
Sbjct: 628  RIQQEHDRKELSLKADHSEELKRVQLQAEDDLREKTILLRNEHEVQIKVLRHQHEDECKK 687

Query: 185  FQEQLECQKSKEERQRALLQSQWKGMDGNPPEDQEVNSKKANFISSIKKRDSDGKNRNQ- 361
             QE+L+ QKS+E+RQRALLQ QWK M     ED EVNSKK   ISSIK RDS  + R+Q 
Sbjct: 688  LQEELDRQKSREDRQRALLQLQWKVMSDKTQEDPEVNSKKDYSISSIKMRDSSNRKRSQC 747

Query: 362  STIRPHKEGKMTNKILESSPLLRATQTPVSNILKKVEKVDTGGV----KHSRK 508
            + +R     K        SP   ATQTPVSN+LKKVE V+ G      KHS+K
Sbjct: 748  ALVRVENREK-------DSPFPGATQTPVSNLLKKVENVNPGSAISVPKHSKK 793


>ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-like [Vitis vinifera]
          Length = 868

 Score =  134 bits (336), Expect = 3e-29
 Identities = 83/172 (48%), Positives = 105/172 (61%), Gaps = 11/172 (6%)
 Frame = +2

Query: 26   RSENEEVRKKV-IELQKGQEVLMVQLQ------KKTMLLRKDLEGQIRALRCQHEDECQK 184
            R + E  RK++ ++    +E+  VQLQ      +KT+LLR + E QI+ LR QHEDEC+K
Sbjct: 628  RIQQEHDRKELSLKADHSEELKRVQLQAEDDLREKTILLRNEHEVQIKVLRHQHEDECKK 687

Query: 185  FQEQLECQKSKEERQRALLQSQWKGMDGNPPEDQEVNSKKANFISSIKKRDSDGKNRNQS 364
             QE+L+ QKS+E+RQRALLQ QWK M     ED EVNSKK   ISSIK RDS  + R+Q 
Sbjct: 688  LQEELDRQKSREDRQRALLQLQWKVMSDKTQEDPEVNSKKDYSISSIKMRDSSNRKRSQC 747

Query: 365  TIRPHKEGKMTNKILESSPLLRATQTPVSNILKKVEKVDTGGV----KHSRK 508
             +               SP   ATQTPVSN+LKKVE V+ G      KHS+K
Sbjct: 748  AL--------------DSPFPGATQTPVSNLLKKVENVNPGSAISVPKHSKK 785


>ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|222844020|gb|EEE81567.1|
            predicted protein [Populus trichocarpa]
          Length = 874

 Score =  124 bits (310), Expect = 3e-26
 Identities = 75/170 (44%), Positives = 104/170 (61%), Gaps = 11/170 (6%)
 Frame = +2

Query: 32   ENEEVRKKV-IELQKGQEVLMVQLQKKTMLLRKDLEG------QIRALRCQHEDECQKFQ 190
            + E  RK++ ++    +E+   QLQ +  L  K +E       Q++ALRCQHEDEC K Q
Sbjct: 626  QQERDRKEISLKAAHSEELKCAQLQAENELREKIIEFGNEHEVQMKALRCQHEDECGKLQ 685

Query: 191  EQLECQKSKEERQRALLQSQWKGMDGNPPEDQEVNSKKANFISSIKKRDSDGKNRNQSTI 370
            E+L+ QKSKE+RQRALL  QWK M   P ED EVNSKK   +SS+K R   G  R+ +++
Sbjct: 686  EELDLQKSKEDRQRALLHLQWKVMSDKPQEDPEVNSKKEYSVSSVKMRGPGGAKRSHNSL 745

Query: 371  RPHKEGKMTNKILESSPLLRATQTPVSNILKKVEKVDTGGV----KHSRK 508
                 G + N+  + S  L+ATQTPV+ +LKKVE  ++G V    KH +K
Sbjct: 746  -----GSLQNE-KKDSLCLKATQTPVTKLLKKVETPNSGSVMVIPKHHKK 789