BLASTX nr result

ID: Coptis23_contig00024439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024439
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]    320   2e-85
emb|CBI26390.3| unnamed protein product [Vitis vinifera]              312   5e-83
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...   311   8e-83
ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|2...   310   2e-82
ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic su...   304   2e-80

>gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 723

 Score =  320 bits (821), Expect = 2e-85
 Identities = 161/268 (60%), Positives = 195/268 (72%)
 Frame = +1

Query: 1   GDASFSSGQNRPPIVEVIQDDAMEEIGENQAMMPLLVYASREKRPSHPHHFKAGALNVLL 180
           G    +S ++ PP++EVI D    E G  QA MPLLVY SREKRPSH HHFKAGALNVLL
Sbjct: 216 GSEEATSSKDHPPVIEVIDDGPENEAGIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLL 275

Query: 181 RVSGIISNSPYILTLDCDMYCNDSTSARQAMCFHIDPNTSPSLAFVQFPQKFHNIFVDDI 360
           RVSGII+NSPYIL LDCDMYCND TSARQAMCFH+DP  SPSLAF+QFPQKFHNI  +DI
Sbjct: 276 RVSGIITNSPYILVLDCDMYCNDPTSARQAMCFHLDPAISPSLAFIQFPQKFHNINKNDI 335

Query: 361 YNELLRTVFEVLWYGFDGLKGPILSGTGFYMKREALYRSPQQKDLSHVTSTTNVGNSEEF 540
           Y+  LR +F + W G DGL+GP+LSGTGFYMKREALY +  +KD+  +    + G+S EF
Sbjct: 336 YDGQLRKIFVIRWPGIDGLQGPVLSGTGFYMKREALYGNLSEKDVMRLKQ--SFGHSNEF 393

Query: 541 IASLRRDYKTNAFDNDDDTLASLLHEARLLASCTYEQHTQWGEQIGFMYFTVVEDYFTGF 720
           I S+ + Y+ ++  N + + + L  EA+ L+SCTYE++T W           VEDYFTGF
Sbjct: 394 IMSIHKIYQYSSIKNTESS-SKLQQEAQFLSSCTYEKNTLW-----------VEDYFTGF 441

Query: 721 TLHCKGWTSFYYNNPKPAFLGSVTTNLS 804
            LHCKG TS + N  KPAFLGS TTNL+
Sbjct: 442 ILHCKGKTSVFCNPSKPAFLGSSTTNLN 469


>emb|CBI26390.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  312 bits (800), Expect = 5e-83
 Identities = 155/265 (58%), Positives = 191/265 (72%)
 Frame = +1

Query: 10  SFSSGQNRPPIVEVIQDDAMEEIGENQAMMPLLVYASREKRPSHPHHFKAGALNVLLRVS 189
           S SS ++ P  VEVI        G +Q  MPLLVY SREKRPSHPHHFKAGALNVLLRVS
Sbjct: 31  SMSSPRDHPAGVEVI--------GADQVEMPLLVYVSREKRPSHPHHFKAGALNVLLRVS 82

Query: 190 GIISNSPYILTLDCDMYCNDSTSARQAMCFHIDPNTSPSLAFVQFPQKFHNIFVDDIYNE 369
           G+ISNSPYIL LDCDMYCND TSA++AMCFH+DP  SP+LAFVQFPQ+FHNI  +DIY+ 
Sbjct: 83  GLISNSPYILILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKNDIYDS 142

Query: 370 LLRTVFEVLWYGFDGLKGPILSGTGFYMKREALYRSPQQKDLSHVTSTTNVGNSEEFIAS 549
            +R+ F +L  G DGL+GPIL GT FY+KR A Y S  Q D+  +    + G S EFI S
Sbjct: 143 GVRSAFSILLEGLDGLQGPILCGTCFYIKRVAFYGSFIQDDIDILKLRESFGPSNEFIRS 202

Query: 550 LRRDYKTNAFDNDDDTLASLLHEARLLASCTYEQHTQWGEQIGFMYFTVVEDYFTGFTLH 729
           L ++YK +   + +      L E +LLASC+YE  T+WG+++GF+Y +VVEDY TGF +H
Sbjct: 203 LGQNYKPSVSKDGNSLSTIQLQETQLLASCSYENQTKWGKEVGFLYQSVVEDYLTGFIMH 262

Query: 730 CKGWTSFYYNNPKPAFLGSVTTNLS 804
           C+GWTS Y N  KP FLGS  TN++
Sbjct: 263 CRGWTSVYCNPSKPQFLGSGVTNMN 287


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score =  311 bits (798), Expect = 8e-83
 Identities = 158/268 (58%), Positives = 187/268 (69%)
 Frame = +1

Query: 1   GDASFSSGQNRPPIVEVIQDDAMEEIGENQAMMPLLVYASREKRPSHPHHFKAGALNVLL 180
           GD S S   + P I+EVI        G  +A MP+LVY SREKRPSHPHHFKAGALNVLL
Sbjct: 223 GDKSISG--DHPSIIEVI--------GAEEAEMPILVYVSREKRPSHPHHFKAGALNVLL 272

Query: 181 RVSGIISNSPYILTLDCDMYCNDSTSARQAMCFHIDPNTSPSLAFVQFPQKFHNIFVDDI 360
           RVS +ISNSPYIL LDCDMYCND  S RQAMC H+DP  SPSLAFVQFPQ+FHNI  +DI
Sbjct: 273 RVSSMISNSPYILVLDCDMYCNDPASVRQAMCCHLDPILSPSLAFVQFPQRFHNISSNDI 332

Query: 361 YNELLRTVFEVLWYGFDGLKGPILSGTGFYMKREALYRSPQQKDLSHVTSTTNVGNSEEF 540
           Y+  +R+ F  LW G DGL GP+LSGTGFYMKR ALY +  Q D S        G S+EF
Sbjct: 333 YDSQMRSAFSTLWEGMDGLDGPVLSGTGFYMKRVALYGTSIQGDTSLTELRQTFGYSDEF 392

Query: 541 IASLRRDYKTNAFDNDDDTLASLLHEARLLASCTYEQHTQWGEQIGFMYFTVVEDYFTGF 720
           I SL   Y  N   N  D+++ +L EARLLASC +E  T+WGE++G +Y +V ED  TG+
Sbjct: 393 IKSLSPKYLPN-ISNGGDSVSVILKEARLLASCQFENQTKWGEEVGVLYHSVSEDVVTGY 451

Query: 721 TLHCKGWTSFYYNNPKPAFLGSVTTNLS 804
           TLHCKGWTS +    +P F+GS  TNL+
Sbjct: 452 TLHCKGWTSVFCVPSRPQFVGSSVTNLN 479


>ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1|
           predicted protein [Populus trichocarpa]
          Length = 723

 Score =  310 bits (795), Expect = 2e-82
 Identities = 158/268 (58%), Positives = 191/268 (71%)
 Frame = +1

Query: 1   GDASFSSGQNRPPIVEVIQDDAMEEIGENQAMMPLLVYASREKRPSHPHHFKAGALNVLL 180
           G    ++ ++ PP++EVI D+        QA MPLLVY SREKRPSH HHFKAGALNVLL
Sbjct: 216 GSEEATNSKDHPPVIEVINDEPKNVAAIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLL 275

Query: 181 RVSGIISNSPYILTLDCDMYCNDSTSARQAMCFHIDPNTSPSLAFVQFPQKFHNIFVDDI 360
           RVSGI++NSPYIL LDCDMYCND TSARQAMCFH+DP  SPSLAF+QFPQKFHNI  +DI
Sbjct: 276 RVSGIMTNSPYILVLDCDMYCNDPTSARQAMCFHLDPKISPSLAFIQFPQKFHNINKNDI 335

Query: 361 YNELLRTVFEVLWYGFDGLKGPILSGTGFYMKREALYRSPQQKDLSHVTSTTNVGNSEEF 540
           Y+  LR +F + W G DGL+GPILSGTGFYMKREALY +  +KD+  +    + G+S EF
Sbjct: 336 YDGQLRKLFVIRWPGIDGLQGPILSGTGFYMKREALYGNLSEKDVMRLKQ--SFGHSNEF 393

Query: 541 IASLRRDYKTNAFDNDDDTLASLLHEARLLASCTYEQHTQWGEQIGFMYFTVVEDYFTGF 720
           I  + + Y+  A  N + + + L  EA  L+SCTYE++T W           VEDYFTGF
Sbjct: 394 IMLIYKIYQYCAIKNTESS-SKLQQEAPFLSSCTYEKNTLW-----------VEDYFTGF 441

Query: 721 TLHCKGWTSFYYNNPKPAFLGSVTTNLS 804
            LHCKG TS + N  KPAFLGS TTNL+
Sbjct: 442 ILHCKGKTSVFCNPSKPAFLGSSTTNLN 469


>ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like, partial [Vitis vinifera]
          Length = 550

 Score =  304 bits (778), Expect = 2e-80
 Identities = 152/265 (57%), Positives = 189/265 (71%)
 Frame = +1

Query: 10  SFSSGQNRPPIVEVIQDDAMEEIGENQAMMPLLVYASREKRPSHPHHFKAGALNVLLRVS 189
           S SS ++ P  VEVI        G +Q  MPLLVY SREKRPSHPHHFKAGALNVLLRVS
Sbjct: 227 SMSSPRDHPAGVEVI--------GADQVEMPLLVYVSREKRPSHPHHFKAGALNVLLRVS 278

Query: 190 GIISNSPYILTLDCDMYCNDSTSARQAMCFHIDPNTSPSLAFVQFPQKFHNIFVDDIYNE 369
           G+ISNSPYIL LDCDMYCND TSA++AMCFH+DP  SP+LAFVQFPQ+FHNI  +DIY+ 
Sbjct: 279 GLISNSPYILILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKNDIYDS 338

Query: 370 LLRTVFEVLWYGFDGLKGPILSGTGFYMKREALYRSPQQKDLSHVTSTTNVGNSEEFIAS 549
            +R+ F +L  G DGL+GPIL GT FY+KR A Y      ++  +    + G S EFI S
Sbjct: 339 GVRSAFSILLEGLDGLQGPILCGTCFYIKRVAFY-----GNIDILKLRESFGPSNEFIRS 393

Query: 550 LRRDYKTNAFDNDDDTLASLLHEARLLASCTYEQHTQWGEQIGFMYFTVVEDYFTGFTLH 729
           L ++YK +   + +      L E +LLASC+YE  T+WG+++GF+Y +VVEDY TGF +H
Sbjct: 394 LGQNYKPSVSKDGNSLSTIQLQETQLLASCSYENQTKWGKEVGFLYQSVVEDYLTGFIMH 453

Query: 730 CKGWTSFYYNNPKPAFLGSVTTNLS 804
           C+GWTS Y N  KP FLGS  TN++
Sbjct: 454 CRGWTSVYCNPSKPQFLGSGVTNMN 478


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