BLASTX nr result

ID: Coptis23_contig00024432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024432
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31838.3| unnamed protein product [Vitis vinifera]              225   3e-57
ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion pro...   225   3e-57
emb|CBI34748.3| unnamed protein product [Vitis vinifera]              223   1e-56
ref|XP_002276226.1| PREDICTED: multidrug and toxin extrusion pro...   223   1e-56
ref|XP_002303561.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56

>emb|CBI31838.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  225 bits (573), Expect = 3e-57
 Identities = 110/132 (83%), Positives = 121/132 (91%)
 Frame = +2

Query: 2   SILSGLAMGMEPICGQAFGAKKHTLLGLALQRTILLLLCVSLPIALLWMNMKRILIICGQ 181
           SILSGLAMGMEPICGQAFGAK+H LLGL+LQRT+LLLL  SLPIA LW+NMKRIL+ CGQ
Sbjct: 110 SILSGLAMGMEPICGQAFGAKRHALLGLSLQRTVLLLLFTSLPIAFLWLNMKRILLFCGQ 169

Query: 182 DDDIAQEAQSYILYCLPDLLAQSFLHPIRIYLRTQSITLPLTYCATLSILLHIPINYLLV 361
           D+DIA EAQSY+LY LPDL AQS LHP+RIYLRTQSITLPLT+CAT+SI +HIPINYLLV
Sbjct: 170 DEDIAAEAQSYLLYSLPDLFAQSLLHPLRIYLRTQSITLPLTFCATMSIFMHIPINYLLV 229

Query: 362 SVLNLGIKGVAL 397
           S LNLGIKGVAL
Sbjct: 230 SHLNLGIKGVAL 241


>ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Vitis
           vinifera]
          Length = 534

 Score =  225 bits (573), Expect = 3e-57
 Identities = 110/132 (83%), Positives = 121/132 (91%)
 Frame = +2

Query: 2   SILSGLAMGMEPICGQAFGAKKHTLLGLALQRTILLLLCVSLPIALLWMNMKRILIICGQ 181
           SILSGLAMGMEPICGQAFGAK+H LLGL+LQRT+LLLL  SLPIA LW+NMKRIL+ CGQ
Sbjct: 110 SILSGLAMGMEPICGQAFGAKRHALLGLSLQRTVLLLLFTSLPIAFLWLNMKRILLFCGQ 169

Query: 182 DDDIAQEAQSYILYCLPDLLAQSFLHPIRIYLRTQSITLPLTYCATLSILLHIPINYLLV 361
           D+DIA EAQSY+LY LPDL AQS LHP+RIYLRTQSITLPLT+CAT+SI +HIPINYLLV
Sbjct: 170 DEDIAAEAQSYLLYSLPDLFAQSLLHPLRIYLRTQSITLPLTFCATMSIFMHIPINYLLV 229

Query: 362 SVLNLGIKGVAL 397
           S LNLGIKGVAL
Sbjct: 230 SHLNLGIKGVAL 241


>emb|CBI34748.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  223 bits (569), Expect = 1e-56
 Identities = 110/132 (83%), Positives = 121/132 (91%)
 Frame = +2

Query: 2   SILSGLAMGMEPICGQAFGAKKHTLLGLALQRTILLLLCVSLPIALLWMNMKRILIICGQ 181
           SILSGLAMGMEPICGQAFGA+++ LLGL LQRT+LLLL  S+PIA LW NMK IL+ CGQ
Sbjct: 116 SILSGLAMGMEPICGQAFGAQRYKLLGLTLQRTVLLLLLTSIPIAFLWFNMKEILLFCGQ 175

Query: 182 DDDIAQEAQSYILYCLPDLLAQSFLHPIRIYLRTQSITLPLTYCATLSILLHIPINYLLV 361
           D+DIA EAQSYILY LPDL+AQSFLHP+RIYLRTQSITLPLTYCATL+ILLHIPINY LV
Sbjct: 176 DEDIATEAQSYILYSLPDLVAQSFLHPLRIYLRTQSITLPLTYCATLAILLHIPINYFLV 235

Query: 362 SVLNLGIKGVAL 397
           SVL+LGIKGVAL
Sbjct: 236 SVLDLGIKGVAL 247


>ref|XP_002276226.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Vitis
           vinifera]
          Length = 530

 Score =  223 bits (569), Expect = 1e-56
 Identities = 110/132 (83%), Positives = 121/132 (91%)
 Frame = +2

Query: 2   SILSGLAMGMEPICGQAFGAKKHTLLGLALQRTILLLLCVSLPIALLWMNMKRILIICGQ 181
           SILSGLAMGMEPICGQAFGA+++ LLGL LQRT+LLLL  S+PIA LW NMK IL+ CGQ
Sbjct: 116 SILSGLAMGMEPICGQAFGAQRYKLLGLTLQRTVLLLLLTSIPIAFLWFNMKEILLFCGQ 175

Query: 182 DDDIAQEAQSYILYCLPDLLAQSFLHPIRIYLRTQSITLPLTYCATLSILLHIPINYLLV 361
           D+DIA EAQSYILY LPDL+AQSFLHP+RIYLRTQSITLPLTYCATL+ILLHIPINY LV
Sbjct: 176 DEDIATEAQSYILYSLPDLVAQSFLHPLRIYLRTQSITLPLTYCATLAILLHIPINYFLV 235

Query: 362 SVLNLGIKGVAL 397
           SVL+LGIKGVAL
Sbjct: 236 SVLDLGIKGVAL 247


>ref|XP_002303561.1| predicted protein [Populus trichocarpa] gi|222840993|gb|EEE78540.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  222 bits (565), Expect = 3e-56
 Identities = 109/132 (82%), Positives = 122/132 (92%)
 Frame = +2

Query: 2   SILSGLAMGMEPICGQAFGAKKHTLLGLALQRTILLLLCVSLPIALLWMNMKRILIICGQ 181
           SILSGL+MGMEPICGQAFGAK++ LLGLALQRTILLL  VS+PIALLW NMK+IL+ CGQ
Sbjct: 54  SILSGLSMGMEPICGQAFGAKRYKLLGLALQRTILLLFLVSIPIALLWFNMKKILLFCGQ 113

Query: 182 DDDIAQEAQSYILYCLPDLLAQSFLHPIRIYLRTQSITLPLTYCATLSILLHIPINYLLV 361
           +DDI+ EAQ YILY LPDL+AQS LHP+RIYLR+QSITLPLT+CATLSILLHIP+NYLLV
Sbjct: 114 EDDISTEAQLYILYSLPDLVAQSILHPLRIYLRSQSITLPLTFCATLSILLHIPVNYLLV 173

Query: 362 SVLNLGIKGVAL 397
           SV NLGIKGVAL
Sbjct: 174 SVFNLGIKGVAL 185


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