BLASTX nr result

ID: Coptis23_contig00024430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024430
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21495.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...    88   8e-16
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...    69   4e-10
gb|AAM62516.1| unknown [Arabidopsis thaliana]                          69   4e-10

>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = -1

Query: 255 SKLCDLFREVERMGFSSKSRMFVHGLLTLSCMSSETIRNKLEVFQSFGYSKEEYVGMFRK 76
           S L DL      MGFS +SRM V+ L T+SC+  ET+R K E+F+S+G++++E + MFR+
Sbjct: 203 STLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKKFELFRSWGFTEQECIEMFRR 262

Query: 75  APGMPRVSVEKLRLGLEFFLKGIGF 1
            PG+ R S EKL+LG+EFF+  + F
Sbjct: 263 TPGLLRASEEKLKLGMEFFMNTMKF 287


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = -1

Query: 255 SKLCDLFREVERMGFSSKSRMFVHGLLTLSCMSSETIRNKLEVFQSFGYSKEEYVGMFRK 76
           S L DL      MGFS +SRM V+ L T+SC+  ET+R K E+F+S+G++++E + MFR+
Sbjct: 222 STLKDLVSRAVDMGFSIESRMLVYALYTISCLRDETLRKKFELFRSWGFTEQECIEMFRR 281

Query: 75  APGMPRVSVEKLRLGLEFFLKGIGF 1
            PG+ R S EKL+LG+EFF+  + F
Sbjct: 282 TPGLLRASEEKLKLGMEFFMNTMKF 306


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/85 (51%), Positives = 57/85 (67%)
 Frame = -1

Query: 255 SKLCDLFREVERMGFSSKSRMFVHGLLTLSCMSSETIRNKLEVFQSFGYSKEEYVGMFRK 76
           S L DL  +V  MGFS  SRM V+ L T+SCMS ET   K+E+ + FG+S+ E   MFRK
Sbjct: 197 SALRDLVSQVLNMGFSVNSRMLVYALYTVSCMSHETFGKKIEILKKFGFSEYECTEMFRK 256

Query: 75  APGMPRVSVEKLRLGLEFFLKGIGF 1
            PG+ R S +KL+LGL+FF+  I F
Sbjct: 257 QPGLLRSSEKKLKLGLDFFINTIKF 281


>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/68 (47%), Positives = 49/68 (72%)
 Frame = -1

Query: 219  MGFSSKSRMFVHGLLTLSCMSSETIRNKLEVFQSFGYSKEEYVGMFRKAPGMPRVSVEKL 40
            MGF+  SRM VH + ++S +S +T R KL++   FG+S EE + MFR++P + R S +K+
Sbjct: 1250 MGFNENSRMLVHAIHSISSLSYKTFRRKLKLIICFGFSNEEGLQMFRRSPTLLRTSEKKV 1309

Query: 39   RLGLEFFL 16
            ++GLEFFL
Sbjct: 1310 KVGLEFFL 1317


>gb|AAM62516.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/72 (41%), Positives = 51/72 (70%)
 Frame = -1

Query: 219 MGFSSKSRMFVHGLLTLSCMSSETIRNKLEVFQSFGYSKEEYVGMFRKAPGMPRVSVEKL 40
           +GF+  SRM VH +++LS +S +T   K+++F + G+S++E   + R++PG+ R S +KL
Sbjct: 226 LGFTLNSRMLVHAIISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKL 285

Query: 39  RLGLEFFLKGIG 4
            LG EF+LK +G
Sbjct: 286 TLGFEFYLKRMG 297


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