BLASTX nr result

ID: Coptis23_contig00024429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024429
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21495.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...    86   2e-15
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...    72   5e-11
gb|AAM62516.1| unknown [Arabidopsis thaliana]                          66   3e-09

>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/70 (57%), Positives = 56/70 (80%)
 Frame = -1

Query: 210 FLKGIGFERDVLLRMPRLLMYSMEKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEF 31
           F+  + FE+ +L+  P +LM SME RVIPRY VL+ILKSK+LLKR  SF+NV+ L+++EF
Sbjct: 281 FMNTMKFEKTLLVHRPTILMLSMEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEF 340

Query: 30  LDKYISKYRD 1
           LDK+IS++ D
Sbjct: 341 LDKFISRFAD 350


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/70 (57%), Positives = 56/70 (80%)
 Frame = -1

Query: 210 FLKGIGFERDVLLRMPRLLMYSMEKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEF 31
           F+  + FE+ +L+  P +LM SME RVIPRY VL+ILKSK+LLKR  SF+NV+ L+++EF
Sbjct: 300 FMNTMKFEKTLLVHRPTILMLSMEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEF 359

Query: 30  LDKYISKYRD 1
           LDK+IS++ D
Sbjct: 360 LDKFISRFAD 369


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/70 (55%), Positives = 54/70 (77%)
 Frame = -1

Query: 210 FLKGIGFERDVLLRMPRLLMYSMEKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEF 31
           F+  I F+R+VL+  P  LM SME+RVIPRY VLEI+K KKLLK+  SF+NV+ L+E+EF
Sbjct: 275 FINTIKFKREVLVYRPTCLMLSMEERVIPRYKVLEIMKLKKLLKKQPSFINVLNLTEEEF 334

Query: 30  LDKYISKYRD 1
           + K+I+ + D
Sbjct: 335 VQKFIASFPD 344


>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/70 (48%), Positives = 50/70 (71%)
 Frame = -1

Query: 210  FLKGIGFERDVLLRMPRLLMYSMEKRVIPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEF 31
            FL  +   + VL+  PR+LMYSME RV+PRY V ++L  KKL K+  S+++++ LSE+ F
Sbjct: 1316 FLHTVMLPKSVLVHQPRVLMYSMEDRVLPRYRVFQLLIEKKLCKKVPSYIHLLCLSEEVF 1375

Query: 30   LDKYISKYRD 1
            LDKYI  +R+
Sbjct: 1376 LDKYIPHFRE 1385


>gb|AAM62516.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/74 (41%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -1

Query: 210 FLKGIGFERDVLLRMPRLLMYSMEKRVIPRYFVLEILKSKKLL----KRNTSFVNVIQLS 43
           +LK +G ER+ L + P +L Y++EKRVIPR  VL+IL+ K LL    K+  + V +++++
Sbjct: 292 YLKRMGIEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMT 351

Query: 42  EDEFLDKYISKYRD 1
           E+ FL+KY+ ++ D
Sbjct: 352 EEAFLEKYVVRFGD 365


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