BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024428
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   138   1e-30
gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]       119   5e-25
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...   117   3e-24
gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis]              117   3e-24
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]         117   3e-24

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  138 bits (348), Expect = 1e-30
 Identities = 65/94 (69%), Positives = 76/94 (80%)
 Frame = +1

Query: 457 LPEYLRSQGIIHQTSCVGIPQQNGVAERKNRHLLETTRALMLGMNVPKHYWSHGILTVAY 636
           +  YL S GI+HQTSCV  PQQNGVAERKNR LLE TRA+M+ MNVPKH+WS+G+LT  Y
Sbjct: 628 MKNYLISHGIVHQTSCVNTPQQNGVAERKNRDLLEKTRAIMMQMNVPKHFWSYGVLTATY 687

Query: 637 LINCLPNRVLGFKSPLEVLKARPLDLSHLRVFGC 738
           LIN LP+RVL F  PLEVL+ +  DLSHL+VFGC
Sbjct: 688 LINRLPSRVLDFLCPLEVLQQKKPDLSHLKVFGC 721


>gb|ADK92880.1| retrotransposon 4 protein [Hypericum perforatum]
          Length = 1347

 Score =  119 bits (299), Expect = 5e-25
 Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
 Frame = +1

Query: 415 RNVLIIRADN---YLGLLPEYLRSQGIIHQTSCVGIPQQNGVAERKNRHLLETTRALMLG 585
           + + I+R DN   Y+G   +YL+  GIIHQT+CV  PQQNGVAERKNRHLL   RA+M  
Sbjct: 532 KKIKILRTDNGTKYMGGFKDYLKKFGIIHQTTCVYTPQQNGVAERKNRHLLNVARAMMFK 591

Query: 586 MNVPKHYWSHGILTVAYLINCLPNRVLGFKSPLEVLKARPLDLSHLRVFGC 738
           MNV K +WS  +LT  +LIN +P+      +P+E+L  +  DLS+LRVFGC
Sbjct: 592 MNVKKRFWSDAVLTACHLINRIPSATTSGLAPIEILLNKKPDLSYLRVFGC 642


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score =  117 bits (292), Expect = 3e-24
 Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
 Frame = +1

Query: 421 VLIIRADNYLGLLPE----YLRSQGIIHQTSCVGIPQQNGVAERKNRHLLETTRALMLGM 588
           V IIR DN    +      Y+  +GIIHQT+C G P QNGVAERKNRHLLE  R+LM  M
Sbjct: 360 VKIIRTDNGTEYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQM 419

Query: 589 NVPKHYWSHGILTVAYLINCLPNRVLGFKSPLEVLKARPLDLSHLRVFGCV 741
           NVPK+ WS  ++T AYLIN +P+R+LG KSP E+L  +       +VFGCV
Sbjct: 420 NVPKYLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKREFKVPPKVFGCV 470


>gb|AAZ41811.1| 01P13-1 [Brassica rapa subsp. pekinensis]
          Length = 1545

 Score =  117 bits (292), Expect = 3e-24
 Identities = 61/112 (54%), Positives = 77/112 (68%), Gaps = 5/112 (4%)
 Frame = +1

Query: 421 VLIIRADN---YLG-LLPEYLRSQGIIHQTSCVGIPQQNGVAERKNRHLLETTRALMLGM 588
           + I R+DN   Y G    ++L   GI+HQTSC   PQQNGVAERKNRHL+E +R++M   
Sbjct: 648 IKIFRSDNGGEYTGHAFRDHLAQHGILHQTSCPYTPQQNGVAERKNRHLMEVSRSMMFHK 707

Query: 589 NVPKHYWSHGILTVAYLINCLPNRVLGFKSPLEVL-KARPLDLSHLRVFGCV 741
            VPK YWS  ++T  YLIN +P R+L  +SP EVL K+RP+ L HLR FGCV
Sbjct: 708 GVPKRYWSDAVMTACYLINRIPTRILADQSPFEVLNKSRPV-LDHLRTFGCV 758


>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score =  117 bits (292), Expect = 3e-24
 Identities = 60/111 (54%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
 Frame = +1

Query: 421 VLIIRADNYLGLLPE----YLRSQGIIHQTSCVGIPQQNGVAERKNRHLLETTRALMLGM 588
           V IIR DN    +      Y+  +GIIHQT+C G P QNGVAERKNRHLLE  R+LM  M
Sbjct: 529 VKIIRTDNGTEYINNEFVSYVSDEGIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQM 588

Query: 589 NVPKHYWSHGILTVAYLINCLPNRVLGFKSPLEVLKARPLDLSHLRVFGCV 741
           NVPK+ WS  ++T AYLIN +P+R+LG KSP E+L  +       +VFGCV
Sbjct: 589 NVPKYLWSEAVMTAAYLINRMPSRILGMKSPAELLLGKREFKVPPKVFGCV 639