BLASTX nr result

ID: Coptis23_contig00024424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024424
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arab...    96   3e-18
ref|NP_200749.1| Rab5-interacting family protein [Arabidopsis th...    96   3e-18
dbj|BAF01013.1| putative Rab5-interacting protein - like [Arabid...    95   1e-17
ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 ...    94   2e-17
ref|XP_004143124.1| PREDICTED: uncharacterized protein C20orf24 ...    93   4e-17

>ref|XP_002866329.1| hypothetical protein ARALYDRAFT_919171 [Arabidopsis lyrata subsp.
           lyrata] gi|297312164|gb|EFH42588.1| hypothetical protein
           ARALYDRAFT_919171 [Arabidopsis lyrata subsp. lyrata]
          Length = 129

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = -1

Query: 583 IVYGYYAIILKVDEEDFGGHAALLQEGLFASFTLFLLAWILVYSLAHF 440
           IVYGYYA+ILKVDEEDFGGHAALLQEGLFAS TLFLLAWILVYSLAHF
Sbjct: 82  IVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLAWILVYSLAHF 129


>ref|NP_200749.1| Rab5-interacting family protein [Arabidopsis thaliana]
           gi|46931208|gb|AAT06408.1| At5g59410 [Arabidopsis
           thaliana] gi|332009799|gb|AED97182.1| Rab5-interacting
           family protein [Arabidopsis thaliana]
          Length = 130

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 46/48 (95%), Positives = 47/48 (97%)
 Frame = -1

Query: 583 IVYGYYAIILKVDEEDFGGHAALLQEGLFASFTLFLLAWILVYSLAHF 440
           IVYGYYA+ILKVDEEDFGGHAALLQEGLFAS TLFLLAWILVYSLAHF
Sbjct: 83  IVYGYYAMILKVDEEDFGGHAALLQEGLFASLTLFLLAWILVYSLAHF 130


>dbj|BAF01013.1| putative Rab5-interacting protein - like [Arabidopsis thaliana]
          Length = 130

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = -1

Query: 583 IVYGYYAIILKVDEEDFGGHAALLQEGLFASFTLFLLAWILVYSLAHF 440
           IVYGYYA+ILKVDEEDFGGHA LLQEGLFAS TLFLLAWILVYSLAHF
Sbjct: 83  IVYGYYAMILKVDEEDFGGHAVLLQEGLFASLTLFLLAWILVYSLAHF 130


>ref|XP_002283455.1| PREDICTED: uncharacterized protein C20orf24 homolog [Vitis
           vinifera] gi|297746059|emb|CBI16115.3| unnamed protein
           product [Vitis vinifera]
          Length = 129

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -1

Query: 583 IVYGYYAIILKVDEEDFGGHAALLQEGLFASFTLFLLAWILVYSLAHF 440
           I+YGYYAIILK+DEEDFGGH ALLQEGLFAS TLFLLAWILVYSL HF
Sbjct: 82  IIYGYYAIILKIDEEDFGGHGALLQEGLFASITLFLLAWILVYSLVHF 129


>ref|XP_004143124.1| PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis
           sativus] gi|449518332|ref|XP_004166196.1| PREDICTED:
           uncharacterized protein C20orf24 homolog [Cucumis
           sativus]
          Length = 129

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 43/48 (89%), Positives = 46/48 (95%)
 Frame = -1

Query: 583 IVYGYYAIILKVDEEDFGGHAALLQEGLFASFTLFLLAWILVYSLAHF 440
           +VYGYYA+ILKVDEE+FGGH ALLQEGLFAS TLFLLAWILVYSLAHF
Sbjct: 82  VVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLLAWILVYSLAHF 129


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