BLASTX nr result

ID: Coptis23_contig00024415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024415
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18131.3| unnamed protein product [Vitis vinifera]              264   3e-68
ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265...   264   3e-68
ref|XP_002273049.2| PREDICTED: uncharacterized protein LOC100263...   246   8e-63
emb|CBI25446.3| unnamed protein product [Vitis vinifera]              235   2e-59
ref|XP_002534265.1| conserved hypothetical protein [Ricinus comm...   191   3e-46

>emb|CBI18131.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  264 bits (674), Expect = 3e-68
 Identities = 164/336 (48%), Positives = 199/336 (59%), Gaps = 8/336 (2%)
 Frame = +3

Query: 3    SSNSTVEENERKASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQM 182
            SSNSTVEENE+K  S  VRPYVRSKMPRLRWTPDLH  FV+AVERLGGQ+RATPKLVLQ+
Sbjct: 72   SSNSTVEENEKKGHSGAVRPYVRSKMPRLRWTPDLHLRFVHAVERLGGQERATPKLVLQL 131

Query: 183  MNIKGLSIAHVKSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP 362
            MNIKGL+IAHVKSHLQMYRSKKI+D GQV+ D  HL+E  D +IYN SQLPMLQG NQRP
Sbjct: 132  MNIKGLNIAHVKSHLQMYRSKKIEDPGQVLADHRHLVESGDPNIYNLSQLPMLQGLNQRP 191

Query: 363  SPDFRYDIXXXXXXXXXXXXPYVGGGLDDRGKRTASAGFYGLIAERISSGITNN---LNF 533
            +  FRY              P++G    D   +T   GFYG + ERI  G  NN    NF
Sbjct: 192  TSSFRYGDASWSAHENWMHSPFIGRSSVD---KTTRPGFYGSVTERIFGGNNNNSTSCNF 248

Query: 534  HKGNFDTSEQTRNRSYGSNDRYQLR-SDLRSWRTRISAGNIEPDFITQFQARGREPAVNL 710
            H G    +E +   ++   D +Q    D  SWR +  +   E + +TQ QA  RE   ++
Sbjct: 249  HMGT-SLNEYSTWGTHVRKDSFQTSFHDHESWRGQAGSSLKELNQLTQMQAHVRERREHM 307

Query: 711  -LQNTSIHETGQRTPTEDKNKLKRKAXXXXXXXXXXXKITSRQDVCQRDLDD-EVD-XXX 881
             L++    +    T  ++   +KRKA           K+T R D   R L+D EVD    
Sbjct: 308  SLKSRIPSDMNTATNLQEWRTVKRKASDCDLDLNLSLKLTPRNDETARGLEDNEVDSCNL 367

Query: 882  XXXXXXXXXXKRNRLKE-RDDYREHAKMTSTLDLTL 986
                      K +RLKE RDD  EHA   STLDLT+
Sbjct: 368  SLSLYSPSSSKLSRLKEGRDDSMEHATRASTLDLTI 403


>ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265991 [Vitis vinifera]
            gi|147820277|emb|CAN73581.1| hypothetical protein
            VITISV_002087 [Vitis vinifera]
          Length = 370

 Score =  264 bits (674), Expect = 3e-68
 Identities = 164/336 (48%), Positives = 199/336 (59%), Gaps = 8/336 (2%)
 Frame = +3

Query: 3    SSNSTVEENERKASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQM 182
            SSNSTVEENE+K  S  VRPYVRSKMPRLRWTPDLH  FV+AVERLGGQ+RATPKLVLQ+
Sbjct: 39   SSNSTVEENEKKGHSGAVRPYVRSKMPRLRWTPDLHLRFVHAVERLGGQERATPKLVLQL 98

Query: 183  MNIKGLSIAHVKSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP 362
            MNIKGL+IAHVKSHLQMYRSKKI+D GQV+ D  HL+E  D +IYN SQLPMLQG NQRP
Sbjct: 99   MNIKGLNIAHVKSHLQMYRSKKIEDPGQVLADHRHLVESGDPNIYNLSQLPMLQGLNQRP 158

Query: 363  SPDFRYDIXXXXXXXXXXXXPYVGGGLDDRGKRTASAGFYGLIAERISSGITNN---LNF 533
            +  FRY              P++G    D   +T   GFYG + ERI  G  NN    NF
Sbjct: 159  TSSFRYGDASWSAHENWMHSPFIGRSSVD---KTTRPGFYGSVTERIFGGNNNNSTSCNF 215

Query: 534  HKGNFDTSEQTRNRSYGSNDRYQLR-SDLRSWRTRISAGNIEPDFITQFQARGREPAVNL 710
            H G    +E +   ++   D +Q    D  SWR +  +   E + +TQ QA  RE   ++
Sbjct: 216  HMGT-SLNEYSTWGTHVRKDSFQTSFHDHESWRGQAGSSLKELNQLTQMQAHVRERREHM 274

Query: 711  -LQNTSIHETGQRTPTEDKNKLKRKAXXXXXXXXXXXKITSRQDVCQRDLDD-EVD-XXX 881
             L++    +    T  ++   +KRKA           K+T R D   R L+D EVD    
Sbjct: 275  SLKSRIPSDMNTATNLQEWRTVKRKASDCDLDLNLSLKLTPRNDETARGLEDNEVDSCNL 334

Query: 882  XXXXXXXXXXKRNRLKE-RDDYREHAKMTSTLDLTL 986
                      K +RLKE RDD  EHA   STLDLT+
Sbjct: 335  SLSLYSPSSSKLSRLKEGRDDSMEHATRASTLDLTI 370


>ref|XP_002273049.2| PREDICTED: uncharacterized protein LOC100263821 [Vitis vinifera]
          Length = 376

 Score =  246 bits (628), Expect = 8e-63
 Identities = 155/342 (45%), Positives = 194/342 (56%), Gaps = 14/342 (4%)
 Frame = +3

Query: 3    SSNSTVEENERKASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQM 182
            SSNSTVEE+ERKA S  VR YVRSKMPRLRWTPDLH CF++AVERLGGQDRATPKLVLQ+
Sbjct: 45   SSNSTVEESERKAGSGSVRRYVRSKMPRLRWTPDLHLCFLHAVERLGGQDRATPKLVLQL 104

Query: 183  MNIKGLSIAHVKSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP 362
            M+IKGLSI+HVKSHLQMYRSKKIDD  QV+ +QG  +EG D+HIY  S LPMLQ FN+RP
Sbjct: 105  MDIKGLSISHVKSHLQMYRSKKIDDPNQVMMEQGLFIEGGDHHIYKLSHLPMLQSFNRRP 164

Query: 363  -SPDFRYD---IXXXXXXXXXXXXPYVGGGLDDRGKRTASAGFYGLIAERI----SSGIT 518
             +  FRYD                PY GG   DR K     G Y  ++ERI         
Sbjct: 165  DTSGFRYDSASASWRASMANQTYSPYRGGDASDRSKN----GGYSSVSERIFRSNKGSSV 220

Query: 519  NNLNFHKGNFDTSEQ-TRNRSYGSNDRYQLRSDLR-SWRTRISAGNIEPDFITQFQARGR 692
             N  FH GN   + Q T N ++ + + +QL S    SWR++I   +I+ +++       R
Sbjct: 221  LNYEFHVGNSSFNGQATWNNAHHTREEFQLYSQSHGSWRSQIRPSSIQSNYLQPQVLESR 280

Query: 693  EPAVNLLQNTSIHETGQRTPTEDKNKLKRKAXXXXXXXXXXXKI----TSRQDVCQRDLD 860
            +  VN L N    +  Q+T       LKRK+            +     S     ++   
Sbjct: 281  KQQVNRLNNPPPPQENQKT------MLKRKSSDSNFDLDLNLSLKPAPKSHDHHLEKMDS 334

Query: 861  DEVDXXXXXXXXXXXXXKRNRLKERDDYREHAKMTSTLDLTL 986
             E+D             K +R+KE D  R+HA+  STLDLTL
Sbjct: 335  TEIDSSLSLSLFSPPPSKLSRVKEGDGSRKHAEGASTLDLTL 376


>emb|CBI25446.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  235 bits (599), Expect = 2e-59
 Identities = 148/333 (44%), Positives = 187/333 (56%), Gaps = 14/333 (4%)
 Frame = +3

Query: 3    SSNSTVEENERKASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQM 182
            SSNSTVEE+ERKA S  VR YVRSKMPRLRWTPDLH CF++AVERLGGQDRATPKLVLQ+
Sbjct: 138  SSNSTVEESERKAGSGSVRRYVRSKMPRLRWTPDLHLCFLHAVERLGGQDRATPKLVLQL 197

Query: 183  MNIKGLSIAHVKSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP 362
            M+IKGLSI+HVKSHLQMYRSKKIDD  QV+ +QG  +EG D+HIY  S LPMLQ FN+RP
Sbjct: 198  MDIKGLSISHVKSHLQMYRSKKIDDPNQVMMEQGLFIEGGDHHIYKLSHLPMLQSFNRRP 257

Query: 363  -SPDFRYD---IXXXXXXXXXXXXPYVGGGLDDRGKRTASAGFYGLIAERI----SSGIT 518
             +  FRYD                PY GG   DR K     G Y  ++ERI         
Sbjct: 258  DTSGFRYDSASASWRASMANQTYSPYRGGDASDRSKN----GGYSSVSERIFRSNKGSSV 313

Query: 519  NNLNFHKGNFDTSEQ-TRNRSYGSNDRYQLRSDLR-SWRTRISAGNIEPDFITQFQARGR 692
             N  FH GN   + Q T N ++ + + +QL S    SWR++I   +I+ +++       R
Sbjct: 314  LNYEFHVGNSSFNGQATWNNAHHTREEFQLYSQSHGSWRSQIRPSSIQSNYLQPQVLESR 373

Query: 693  EPAVNLLQNTSIHETGQRTPTEDKNKLKRKAXXXXXXXXXXXKI----TSRQDVCQRDLD 860
            +  VN L N    +  Q+T       LKRK+            +     S     ++   
Sbjct: 374  KQQVNRLNNPPPPQENQKT------MLKRKSSDSNFDLDLNLSLKPAPKSHDHHLEKMDS 427

Query: 861  DEVDXXXXXXXXXXXXXKRNRLKERDDYREHAK 959
             E+D             K +R+KE D  R+HA+
Sbjct: 428  TEIDSSLSLSLFSPPPSKLSRVKEGDGSRKHAE 460


>ref|XP_002534265.1| conserved hypothetical protein [Ricinus communis]
           gi|223525618|gb|EEF28118.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score =  191 bits (485), Expect = 3e-46
 Identities = 94/126 (74%), Positives = 107/126 (84%)
 Frame = +3

Query: 3   SSNSTVEENERKASSSGVRPYVRSKMPRLRWTPDLHHCFVNAVERLGGQDRATPKLVLQM 182
           SSNSTVEE+++K S   VRPYVRSKMPRLRWTP+LH CFV AVERLGGQDRATPKLVLQ+
Sbjct: 41  SSNSTVEESDKKPS---VRPYVRSKMPRLRWTPELHLCFVKAVERLGGQDRATPKLVLQL 97

Query: 183 MNIKGLSIAHVKSHLQMYRSKKIDDAGQVITDQGHLMEGLDNHIYNFSQLPMLQGFNQRP 362
           MN+ GLSIAHVKSHLQMYRSKKIDD  QV+ D  HLM+  D +IYN SQLPMLQG++QR 
Sbjct: 98  MNVNGLSIAHVKSHLQMYRSKKIDDPSQVMADHRHLMKSGDRNIYNLSQLPMLQGYHQRH 157

Query: 363 SPDFRY 380
           +  +RY
Sbjct: 158 ASSYRY 163


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