BLASTX nr result

ID: Coptis23_contig00024410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024410
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518659.1| conserved hypothetical protein [Ricinus comm...   182   2e-44
ref|XP_002272459.1| PREDICTED: zinc finger SWIM domain-containin...   177   6e-43
ref|XP_002519468.1| conserved hypothetical protein [Ricinus comm...   176   1e-42
ref|XP_002313892.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_004152266.1| PREDICTED: zinc finger SWIM domain-containin...   168   5e-40

>ref|XP_002518659.1| conserved hypothetical protein [Ricinus communis]
           gi|223542040|gb|EEF43584.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 132

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/99 (83%), Positives = 91/99 (91%)
 Frame = -1

Query: 298 MSVSNSIAEEVWKDIKSTRSVTHDQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC 119
           M +SN +A+ VWK ++ TRSVT DQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC
Sbjct: 1   MPISNLVADTVWKSVELTRSVTDDQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC 60

Query: 118 VFQVVGESRRKEEYFCFAEHYCACYSFFYDIVNKGEQLC 2
           +FQVVGESRRKE+YFCF EHYCACYSFFYD VN+GEQLC
Sbjct: 61  IFQVVGESRRKEDYFCFPEHYCACYSFFYDTVNRGEQLC 99


>ref|XP_002272459.1| PREDICTED: zinc finger SWIM domain-containing protein 7 [Vitis
           vinifera] gi|296083085|emb|CBI22489.3| unnamed protein
           product [Vitis vinifera]
          Length = 132

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/99 (82%), Positives = 91/99 (91%)
 Frame = -1

Query: 298 MSVSNSIAEEVWKDIKSTRSVTHDQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC 119
           M  S+ +AE VWK+I+ST SVT DQ+SI+HFLFGKNFERATRIVDQRGVKRI GEPSGR 
Sbjct: 1   MGPSSLVAETVWKEIESTHSVTDDQISIMHFLFGKNFERATRIVDQRGVKRIVGEPSGRW 60

Query: 118 VFQVVGESRRKEEYFCFAEHYCACYSFFYDIVNKGEQLC 2
           +FQVVGESR+KEEYFCFAEHYCACYSFFYDIVN+GEQLC
Sbjct: 61  IFQVVGESRKKEEYFCFAEHYCACYSFFYDIVNRGEQLC 99


>ref|XP_002519468.1| conserved hypothetical protein [Ricinus communis]
           gi|223541331|gb|EEF42882.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 132

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/99 (81%), Positives = 88/99 (88%)
 Frame = -1

Query: 298 MSVSNSIAEEVWKDIKSTRSVTHDQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC 119
           M +SN  A+ VWK ++ TRSVT DQLSILH LFGKNFERATRIVDQRGVKRI+GEPSGRC
Sbjct: 1   MPISNLFADTVWKSVELTRSVTDDQLSILHLLFGKNFERATRIVDQRGVKRITGEPSGRC 60

Query: 118 VFQVVGESRRKEEYFCFAEHYCACYSFFYDIVNKGEQLC 2
           +FQVVGESRRKE+YFCF EHYCACYSFFYD VN GEQLC
Sbjct: 61  IFQVVGESRRKEDYFCFPEHYCACYSFFYDTVNGGEQLC 99


>ref|XP_002313892.1| predicted protein [Populus trichocarpa] gi|222850300|gb|EEE87847.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  174 bits (442), Expect = 5e-42
 Identities = 80/99 (80%), Positives = 91/99 (91%)
 Frame = -1

Query: 298 MSVSNSIAEEVWKDIKSTRSVTHDQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC 119
           MS S+ +A+ VWK I+ST+SVT +QLSILHFLFGKN ERAT+IVDQRGVK+ISG+PSGR 
Sbjct: 1   MSASSLVADTVWKTIESTQSVTEEQLSILHFLFGKNLERATKIVDQRGVKKISGQPSGRS 60

Query: 118 VFQVVGESRRKEEYFCFAEHYCACYSFFYDIVNKGEQLC 2
           +FQVVGESRRKEEYFCF EHYCACYSFFYDIVN+GEQLC
Sbjct: 61  IFQVVGESRRKEEYFCFPEHYCACYSFFYDIVNRGEQLC 99


>ref|XP_004152266.1| PREDICTED: zinc finger SWIM domain-containing protein 7-like
           [Cucumis sativus] gi|449484320|ref|XP_004156850.1|
           PREDICTED: zinc finger SWIM domain-containing protein
           7-like [Cucumis sativus]
          Length = 132

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/99 (80%), Positives = 87/99 (87%)
 Frame = -1

Query: 298 MSVSNSIAEEVWKDIKSTRSVTHDQLSILHFLFGKNFERATRIVDQRGVKRISGEPSGRC 119
           MS S  +AE VWK I+STR VT DQLSILHFLFGKNFERATRIVDQRGVK+ISG PS R 
Sbjct: 1   MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRS 60

Query: 118 VFQVVGESRRKEEYFCFAEHYCACYSFFYDIVNKGEQLC 2
           +FQVVGESRRKEEY CF E++CACYSFFYDIVN+GEQLC
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLC 99


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