BLASTX nr result

ID: Coptis23_contig00024395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024395
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632255.1| PREDICTED: uncharacterized protein LOC100242...   179   4e-43
emb|CBI24314.3| unnamed protein product [Vitis vinifera]              179   4e-43
ref|XP_002523227.1| conserved hypothetical protein [Ricinus comm...   161   1e-37
ref|XP_004140270.1| PREDICTED: uncharacterized protein LOC101204...   157   2e-36
gb|AFK36447.1| unknown [Medicago truncatula]                          154   1e-35

>ref|XP_003632255.1| PREDICTED: uncharacterized protein LOC100242629 [Vitis vinifera]
          Length = 594

 Score =  179 bits (455), Expect = 4e-43
 Identities = 86/110 (78%), Positives = 99/110 (90%)
 Frame = -2

Query: 617 WVKQDKGAEGRGRIARIQRRLLVVEVEKRIMQFQTCVERGQEEDAQCRFGLVLYSLDCLY 438
           WVKQD  AEGRGR+ARIQRRLLVVEVEK IMQ+QTC+ +G+E+DAQC FG+VLYSLD LY
Sbjct: 481 WVKQDTRAEGRGRVARIQRRLLVVEVEKWIMQYQTCMNQGKEKDAQCMFGMVLYSLDRLY 540

Query: 437 RAVERHAKATGEWLSLRQDIIDLSKPNLQTSYKLTLTSRLERVYDCLLPS 288
           RAVERHAKATGEWL LRQDI++L+KP L T+ KL LT+R+ERVYDCLLPS
Sbjct: 541 RAVERHAKATGEWLCLRQDIVELAKPGLDTASKLILTARMERVYDCLLPS 590


>emb|CBI24314.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  179 bits (455), Expect = 4e-43
 Identities = 86/110 (78%), Positives = 99/110 (90%)
 Frame = -2

Query: 617 WVKQDKGAEGRGRIARIQRRLLVVEVEKRIMQFQTCVERGQEEDAQCRFGLVLYSLDCLY 438
           WVKQD  AEGRGR+ARIQRRLLVVEVEK IMQ+QTC+ +G+E+DAQC FG+VLYSLD LY
Sbjct: 502 WVKQDTRAEGRGRVARIQRRLLVVEVEKWIMQYQTCMNQGKEKDAQCMFGMVLYSLDRLY 561

Query: 437 RAVERHAKATGEWLSLRQDIIDLSKPNLQTSYKLTLTSRLERVYDCLLPS 288
           RAVERHAKATGEWL LRQDI++L+KP L T+ KL LT+R+ERVYDCLLPS
Sbjct: 562 RAVERHAKATGEWLCLRQDIVELAKPGLDTASKLILTARMERVYDCLLPS 611


>ref|XP_002523227.1| conserved hypothetical protein [Ricinus communis]
           gi|223537523|gb|EEF39148.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 609

 Score =  161 bits (407), Expect = 1e-37
 Identities = 77/110 (70%), Positives = 94/110 (85%)
 Frame = -2

Query: 617 WVKQDKGAEGRGRIARIQRRLLVVEVEKRIMQFQTCVERGQEEDAQCRFGLVLYSLDCLY 438
           W K+D  AEG+GRIAR QRRLL+VEVEKRIMQ+QT V++G E ++QC FGL+L SLD L+
Sbjct: 497 WFKRDTKAEGKGRIARRQRRLLLVEVEKRIMQYQTFVDQGLENESQCMFGLMLCSLDRLF 556

Query: 437 RAVERHAKATGEWLSLRQDIIDLSKPNLQTSYKLTLTSRLERVYDCLLPS 288
            AVERHAK TGEW SL+QDI DL KP++QT+YKL +TSR+ERVY+CLLPS
Sbjct: 557 HAVERHAKETGEWQSLKQDIFDLGKPSIQTTYKLVVTSRMERVYECLLPS 606


>ref|XP_004140270.1| PREDICTED: uncharacterized protein LOC101204845 [Cucumis sativus]
          Length = 594

 Score =  157 bits (397), Expect = 2e-36
 Identities = 76/110 (69%), Positives = 92/110 (83%)
 Frame = -2

Query: 617 WVKQDKGAEGRGRIARIQRRLLVVEVEKRIMQFQTCVERGQEEDAQCRFGLVLYSLDCLY 438
           W KQD  AEG+GR AR+QRRLLVVEVEK IMQ+Q+ V++G+ +DA+CRFGL+LYSL  LY
Sbjct: 481 WYKQDTRAEGKGRAARLQRRLLVVEVEKAIMQYQSFVDQGRVKDAECRFGLLLYSLGRLY 540

Query: 437 RAVERHAKATGEWLSLRQDIIDLSKPNLQTSYKLTLTSRLERVYDCLLPS 288
            A E+HAKATGEWL LRQDI+DL KP+L T  KL +T R+ERVYDCLLP+
Sbjct: 541 HASEKHAKATGEWLHLRQDILDLGKPSLPTRDKLRITWRMERVYDCLLPA 590


>gb|AFK36447.1| unknown [Medicago truncatula]
          Length = 589

 Score =  154 bits (390), Expect = 1e-35
 Identities = 76/109 (69%), Positives = 90/109 (82%)
 Frame = -2

Query: 617 WVKQDKGAEGRGRIARIQRRLLVVEVEKRIMQFQTCVERGQEEDAQCRFGLVLYSLDCLY 438
           W KQD  AEGRGR+ARIQRRLLVVEVE+RIMQ Q  VE+G E DA    GL+LYSLD LY
Sbjct: 476 WFKQDTKAEGRGRVARIQRRLLVVEVERRIMQHQIYVEQGLERDAHYMLGLILYSLDRLY 535

Query: 437 RAVERHAKATGEWLSLRQDIIDLSKPNLQTSYKLTLTSRLERVYDCLLP 291
            +V+RHA+A+GEW  LRQDIIDL++P LQTS+KL +TSR+ +VYDCLLP
Sbjct: 536 SSVKRHAEASGEWQCLRQDIIDLARPGLQTSHKLAVTSRIIKVYDCLLP 584


Top