BLASTX nr result

ID: Coptis23_contig00024389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024389
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...    65   9e-09
emb|CBI20887.3| unnamed protein product [Vitis vinifera]               59   5e-07

>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
 Frame = -3

Query: 484 ALDDVTRVVPEAQCGTANSFHSCENHPSREAGSSGNDGSSLCRSHDLPDSSAIELVHETS 305
           ++++VT  +PE  C      +  E +   +A  SG+       S++ P  S+ EL   +S
Sbjct: 297 SIEEVTLSIPEIPCELDCPSNYLEPNFPHDARISGSVERQF-NSNEQPAISSFELGQASS 355

Query: 304 DLLETSKHRRVGTDGNQEPESVPFQSSVGFNAP--MENSTMQPQNQELLCITEGDCRAVI 131
            L   S H   G + N++  S+P Q+SVG NA   M N  +     E L I+EGDC    
Sbjct: 356 GL---SSHFNGGNE-NRDTVSIPLQTSVGLNASSSMGNMGVDSDIPEHLLISEGDCCGFR 411

Query: 130 LSEGGTNVCFSLGNMTQSDLNSME-QCTDSSIYQSV-FQSCETTG 2
             E GT+  FS  N+T+   N++E +CTD  + QS  FQ  ET+G
Sbjct: 412 FQEAGTDEYFSSENLTRC-TNAIELECTDPLVCQSSDFQISETSG 455


>emb|CBI20887.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
 Frame = -3

Query: 355 SHDLPDSSAIELVHETSDLLETSKHRRVGTDGNQEPESVPFQSSVGFNAP--MENSTMQP 182
           S++ P  S+ EL   +S L   S H   G + N++  S+P Q+SVG NA   M N  +  
Sbjct: 212 SNEQPAISSFELGQASSGL---SSHFNGGNE-NRDTVSIPLQTSVGLNASSSMGNMGVDS 267

Query: 181 QNQELLCITEGDCRAVILSEGGTNVCFSLGNMTQSDLNSME-QCTDSSIYQSV-FQSCET 8
              E L I+EGDC      E GT+  FS  N+T+   N++E +CTD  + QS  FQ  ET
Sbjct: 268 DIPEHLLISEGDCCGFRFQEAGTDEYFSSENLTRC-TNAIELECTDPLVCQSSDFQISET 326

Query: 7   TG 2
           +G
Sbjct: 327 SG 328


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