BLASTX nr result

ID: Coptis23_contig00024385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024385
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324143.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
dbj|BAK61818.1| serine threonine kinase [Citrus unshiu]                66   3e-09
gb|AAD40140.1|AF149413_21 contains similarity to protein kinase ...    65   8e-09
ref|NP_197987.1| protein kinase-like protein [Arabidopsis thalia...    65   8e-09
ref|XP_002267884.2| PREDICTED: U-box domain-containing protein 3...    64   2e-08

>ref|XP_002324143.1| predicted protein [Populus trichocarpa] gi|222865577|gb|EEF02708.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/116 (35%), Positives = 52/116 (44%)
 Frame = +1

Query: 1   ISAKQKANELHRWKVXXXXXXXXXXXXXXXXXXXXXXXXXKCRVXXXXXXXXXXXXXXXX 180
           +SAKQKA+EL++WK+                         KC+V                
Sbjct: 300 LSAKQKASELNQWKIDEVRKFEEAKLAGEAALAVAELEKAKCKVAIEAAEKSQKLAELEG 359

Query: 181 QXXXXXXXXXXXXXXXXXXXLNVLANNDIRYRKYSIEEIEAATDRFSDSLKIGEGG 348
           Q                   LN LA+ND+RYR+Y+IEEIE ATD+FS S KIGEGG
Sbjct: 360 QKRKHAEKKAERETEEKNRALNALAHNDVRYRRYTIEEIEEATDKFSPSNKIGEGG 415


>dbj|BAK61818.1| serine threonine kinase [Citrus unshiu]
          Length = 763

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 51/116 (43%)
 Frame = +1

Query: 1   ISAKQKANELHRWKVXXXXXXXXXXXXXXXXXXXXXXXXXKCRVXXXXXXXXXXXXXXXX 180
           ++AK+KA EL++WK+                         KCR                 
Sbjct: 321 LNAKKKAKELNQWKIEEAQRFEEARMAEETALAIAEMEKAKCRAAIEAAEKAQKLADAEA 380

Query: 181 QXXXXXXXXXXXXXXXXXXXLNVLANNDIRYRKYSIEEIEAATDRFSDSLKIGEGG 348
           Q                   L  LA+ND+RYRKY+IEEIE ATD+FS+++KIGEGG
Sbjct: 381 QRRKQAELKAKREAEEKNRALTALAHNDVRYRKYTIEEIEEATDKFSEAMKIGEGG 436


>gb|AAD40140.1|AF149413_21 contains similarity to protein kinase domains; Pfam PF00069,
           Score=129.3, E=7e-35, N=1 [Arabidopsis thaliana]
          Length = 675

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 38/116 (32%), Positives = 51/116 (43%)
 Frame = +1

Query: 1   ISAKQKANELHRWKVXXXXXXXXXXXXXXXXXXXXXXXXXKCRVXXXXXXXXXXXXXXXX 180
           ++AK+KANEL++WK+                         KCR                 
Sbjct: 289 LTAKRKANELNQWKIEEARKFEKARLSEEAALAVAEIEKAKCRTAVEAAEKAQRMAELEG 348

Query: 181 QXXXXXXXXXXXXXXXXXXXLNVLANNDIRYRKYSIEEIEAATDRFSDSLKIGEGG 348
           Q                   ++ LA+ND+RYRKYSIEEIE AT+RF++  KIGEGG
Sbjct: 349 QRRKQAEMKAVSEEKDKDRAVSALAHNDVRYRKYSIEEIEEATERFANHRKIGEGG 404


>ref|NP_197987.1| protein kinase-like protein [Arabidopsis thaliana]
           gi|332006147|gb|AED93530.1| protein kinase-like protein
           [Arabidopsis thaliana]
          Length = 703

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 38/116 (32%), Positives = 51/116 (43%)
 Frame = +1

Query: 1   ISAKQKANELHRWKVXXXXXXXXXXXXXXXXXXXXXXXXXKCRVXXXXXXXXXXXXXXXX 180
           ++AK+KANEL++WK+                         KCR                 
Sbjct: 317 LTAKRKANELNQWKIEEARKFEKARLSEEAALAVAEIEKAKCRTAVEAAEKAQRMAELEG 376

Query: 181 QXXXXXXXXXXXXXXXXXXXLNVLANNDIRYRKYSIEEIEAATDRFSDSLKIGEGG 348
           Q                   ++ LA+ND+RYRKYSIEEIE AT+RF++  KIGEGG
Sbjct: 377 QRRKQAEMKAVSEEKDKDRAVSALAHNDVRYRKYSIEEIEEATERFANHRKIGEGG 432


>ref|XP_002267884.2| PREDICTED: U-box domain-containing protein 35-like [Vitis vinifera]
          Length = 761

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/116 (35%), Positives = 48/116 (41%)
 Frame = +1

Query: 1   ISAKQKANELHRWKVXXXXXXXXXXXXXXXXXXXXXXXXXKCRVXXXXXXXXXXXXXXXX 180
           +SAKQKA EL RW++                         KCR                 
Sbjct: 355 LSAKQKAVELQRWRMEEERRLEEARLAEEAAMAIVEKEKAKCRAAIDAAEASQRLAELES 414

Query: 181 QXXXXXXXXXXXXXXXXXXXLNVLANNDIRYRKYSIEEIEAATDRFSDSLKIGEGG 348
           Q                   +N LA NDIRYRKY+IEEIE AT+ FS+S KIGEGG
Sbjct: 415 QRRVNAEMKALKEAEDMKKVINNLAQNDIRYRKYTIEEIEEATEFFSESRKIGEGG 470


Top