BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024381
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              229   3e-58
emb|CCH50966.1| T4.5 [Malus x robusta]                                197   2e-48
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   187   2e-45
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]   187   2e-45
emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]   186   5e-45

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  229 bits (585), Expect = 3e-58
 Identities = 116/183 (63%), Positives = 142/183 (77%)
 Frame = -3

Query: 717  LKHTPDQGLFYRSGSLRLEAYSDVDYAGNPNDRHSTGGYCIYLGYNPITWSAKKQRTVSR 538
            LK+T + GL Y+ GS +L AYSD DYAG+P+DRHSTGG+C          S+KK +TVSR
Sbjct: 1208 LKYTLNHGLVYQPGSHKLVAYSDADYAGDPDDRHSTGGFC----------SSKKHKTVSR 1257

Query: 537  SSTEAEYH*LAYTTAEISWLRFIFKDLGVCLSTPIIWCDNISSISLALNPVFHASTKHLE 358
            SS EAEY  LAYT AE+SWLR +F+DL V LS P IWCDNISSISLA NPVFH+ TKH+E
Sbjct: 1258 SSAEAEYRQLAYTAAELSWLRSLFRDLNVFLSCPRIWCDNISSISLASNPVFHSRTKHIE 1317

Query: 357  VDYHYVREKVVRKELDVRYLCTEDQVADMFTKGLSSAHFKKLANKLMVRSCPISLRGCDS 178
            VDYHYVR+KVVR+EL V Y+ T DQ AD+FTKGLS+  F+ LA+KL VR+ P+SLRG D+
Sbjct: 1318 VDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPVRARPLSLRGNDN 1377

Query: 177  KTK 169
            + +
Sbjct: 1378 QER 1380


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  197 bits (500), Expect = 2e-48
 Identities = 101/179 (56%), Positives = 129/179 (72%), Gaps = 1/179 (0%)
 Frame = -3

Query: 717  LKHTPDQGLFYRSGSLRLEAYSDVDYAGNPNDRHSTGGYCIYLGYNPITWSAKKQRTVSR 538
            LK T D GL++  GS  L A+SD D+AG P DR ST GYC++LG N I+WSAKKQ TV+R
Sbjct: 1480 LKGTVDLGLWFTKGSQCLTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWSAKKQATVAR 1539

Query: 537  SSTEAEYH*LAYTTAEISWLRFIFKDLGV-CLSTPIIWCDNISSISLALNPVFHASTKHL 361
            SSTEAEY  LA T AEI+W+  I  D+    L TP+I+CDN S I+LA NPVFHA TKH+
Sbjct: 1540 SSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHV 1599

Query: 360  EVDYHYVREKVVRKELDVRYLCTEDQVADMFTKGLSSAHFKKLANKLMVRSCPISLRGC 184
            E+DYHY+REKV+   + V+++ +  Q+AD+FTK L++  F  L +KL VRS   SLRGC
Sbjct: 1600 EIDYHYIREKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTSKLSVRSPSFSLRGC 1658


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  187 bits (475), Expect = 2e-45
 Identities = 90/169 (53%), Positives = 124/169 (73%), Gaps = 1/169 (0%)
 Frame = -3

Query: 690 FYRSGSLRLEAYSDVDYAGNPNDRHSTGGYCIYLGYNPITWSAKKQRTVSRSSTEAEYH* 511
           F  S SL L AY+D D+A  P+DR ST GYCI+ G N ++WSA KQ+ VSRSSTE+EY  
Sbjct: 158 FQPSSSLDLIAYTDADWASCPDDRRSTSGYCIFFGGNLVSWSASKQKVVSRSSTESEYRG 217

Query: 510 LAYTTAEISWLRFIFKDLGVCL-STPIIWCDNISSISLALNPVFHASTKHLEVDYHYVRE 334
           LA   AE++W++ + K+L + L   P+++CDN+S+  LA NP+ H+  KH+E+DYH+VRE
Sbjct: 218 LANAAAELTWIQSLLKELFIPLFQPPVLYCDNLSTTYLAANPILHSRAKHVEIDYHFVRE 277

Query: 333 KVVRKELDVRYLCTEDQVADMFTKGLSSAHFKKLANKLMVRSCPISLRG 187
           +V++K LDVR+L +EDQVAD+ TK LS+ HF  L +KL V S P+ LRG
Sbjct: 278 RVLQKTLDVRFLPSEDQVADILTKSLSTQHFLHLRSKLTVLSRPVCLRG 326


>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
          Length = 1394

 Score =  187 bits (475), Expect = 2e-45
 Identities = 92/190 (48%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
 Frame = -3

Query: 717  LKHTPDQGLFYR-SGSLRLEAYSDVDYAGNPNDRHSTGGYCIYLGYNPITWSAKKQRTVS 541
            LK T   GL ++ S S+ L+ YSD D+A  P+DR ST GYC++LG N I+WS+ KQR VS
Sbjct: 1088 LKGTISLGLHFQPSTSMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSKQRLVS 1147

Query: 540  RSSTEAEYH*LAYTTAEISWLRFIFKDLGVCLSTPIIWCDNISSISLALNPVFHASTKHL 361
            +SS E+EY  L   TAE+ W++ + ++L +  S P++WCDN S+  LA NPVFH+ +KH+
Sbjct: 1148 KSSAESEYRGLVSLTAELVWIQSLLQELCLPTSPPVLWCDNQSAAHLAANPVFHSRSKHI 1207

Query: 360  EVDYHYVREKVVRKELDVRYLCTEDQVADMFTKGLSSAHFKKLANKLMVRSCPISLRGCD 181
            E+D H++REKV+R+EL + Y+ + DQ+AD+ TK LS + F  L +KL V S P+SLRG D
Sbjct: 1208 ELDLHFIREKVLRQELQICYVPSTDQLADILTKHLSISQFCTLRSKLTVTSPPMSLRGDD 1267

Query: 180  SKTKPSVSPS 151
            ++T  +++ S
Sbjct: 1268 NQTDSNLTSS 1277


>emb|CAN66359.1| hypothetical protein VITISV_018312 [Vitis vinifera]
          Length = 542

 Score =  186 bits (471), Expect = 5e-45
 Identities = 92/177 (51%), Positives = 126/177 (71%), Gaps = 1/177 (0%)
 Frame = -3

Query: 717 LKHTPDQGLFYRSGSLRLEAYSDVDYAGNPNDRHSTGGYCIYLGYNPITWSAKKQRTVSR 538
           LK+T D GL Y+ GS  + AY D D+AG+P+DR ST GY +++G N I+WSAKKQ  VS+
Sbjct: 351 LKNTLDFGLLYKPGSFAINAYCDSDWAGDPDDRXSTCGYGVFVGPNLISWSAKKQPVVSK 410

Query: 537 SSTEAEYH*LAYTTAEISWLRFIFKDLGVCLS-TPIIWCDNISSISLALNPVFHASTKHL 361
           SSTEAEY  LA  TAE+ WLR +  +L + L   P+IWCDNIS+++LA N +FHA +KH+
Sbjct: 411 SSTEAEYRCLALVTAEVYWLRMLLCELEISLDXXPVIWCDNISALALASNXIFHARSKHI 470

Query: 360 EVDYHYVREKVVRKELDVRYLCTEDQVADMFTKGLSSAHFKKLANKLMVRSCPISLR 190
           EVDYH+VREKV  +++ + ++ T  Q AD+FTKG ++  F  L +KL +   P SLR
Sbjct: 471 EVDYHFVREKVAHRDIILEHISTSIQPADIFTKGHTADXFCFLRDKLAICDLPTSLR 527