BLASTX nr result

ID: Coptis23_contig00024372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024372
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trich...    97   2e-18
ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...    92   6e-17
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich...    87   2e-15

>ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222839772|gb|EEE78095.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1005

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335  QGENFPSWLDFLPLPNLVKISFAKCRRCEHLPPLSRLPLLKTLVMHSLDSVKIIDSGGIG 156
            +G  FP W+  L LPNLV+IS   C  CEHLPP  +L  LK L +  +D+VK I S   G
Sbjct: 720  RGSKFPDWMMELRLPNLVEISLESCMNCEHLPPFGKLRFLKHLQLKRMDTVKCIGSEMYG 779

Query: 155  NG---FTSLEELELDDMPKLEKWSSWNENGGREGILLPCLKKLNINNCPKLTRL 3
            +G   F SLE L L  M  LE+W + N  GGRE  +  CL +L I  CPKL  L
Sbjct: 780  DGENPFPSLERLTLGPMMNLEEWET-NTMGGRE--IFTCLDELQIRKCPKLVEL 830


>ref|XP_002333034.1| predicted protein [Populus trichocarpa] gi|222834470|gb|EEE72947.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335 QGENFPSWLDFLPLPNLVKISFAKCRRCEHLPPLSRLPLLKTLVMHSLDSVKIIDSGGIG 156
           +G  FP W+  L LPNLV+IS   C  CEHLPP  +L  LK L +  +D+VK I S   G
Sbjct: 132 RGSKFPDWMMELRLPNLVEISLESCMNCEHLPPFGKLRFLKHLQLKRMDTVKCIGSEMHG 191

Query: 155 NG---FTSLEELELDDMPKLEKWSSWNENGGREGILLPCLKKLNINNCPKLTRL 3
           +G   F SLE L L  M  LE+W + N  GGRE  +  CL +L I  CPKL  L
Sbjct: 192 DGENPFPSLERLTLGPMMNLEEWET-NSMGGRE--IFTCLDELQIRKCPKLVEL 242


>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335 QGENFPSWLDFLPLPNLVKISFAKCRRCEHLPPLSRLPLLKTLVMHSLDSVKIIDSGGIG 156
           +G  FP W+  L LPNLV+IS   C  CEHLPP  +L  LK L +  +D+VK I S   G
Sbjct: 107 RGSKFPDWMMELRLPNLVEISLESCMNCEHLPPFGKLRFLKHLQLKRMDTVKCIGSEMYG 166

Query: 155 NG---FTSLEELELDDMPKLEKWSSWNENGGREGILLPCLKKLNINNCPKLTRL 3
           +G   F SL+ L L  M  LE+W + N  GG E  +  CL +L I  CPKL  L
Sbjct: 167 DGENPFPSLKRLTLGQMMNLEEWET-NTMGGSE--IFRCLHELQIGKCPKLVEL 217


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223544113|gb|EEF45638.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1104

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/114 (45%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335  QGENFPSWLDFLPLPNLVKISFAKCRRCEHLPPLSRLPLLKTLVMHSLDSVKIIDSGGIG 156
            QG  F SW+  L LPNLV+I    C RCEHLPP   L  L+ LV+  ++ VK I S   G
Sbjct: 755  QGSKFASWMTDLSLPNLVEIELVDCDRCEHLPPFGELKFLEILVLRKINGVKCIGSEIYG 814

Query: 155  NG---FTSLEELELDDMPKLEKWSSWNENGGREGILLPCLKKLNINNCPKLTRL 3
            NG   F SLE L L  M  LE+W       GR+  + P L  L +N+CPKL  L
Sbjct: 815  NGKSSFPSLESLSLVSMDSLEEWEMVE---GRD--IFPVLASLIVNDCPKLVEL 863


>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1091

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
 Frame = -2

Query: 332  GENFPSWLDFLPLPNLVKISFAKCRRCEHLPPLSRLPLLKTLVMHSLDSVKIIDSGGIGN 153
            G  FP+W+  L LPNLV++    C  CE LPP  +L  L+ LV+  +D VK IDS   G+
Sbjct: 727  GSKFPNWMMNLMLPNLVEMELRDCYNCEQLPPFGKLQFLEDLVLQGIDGVKCIDSHVNGD 786

Query: 152  G---FTSLEELELDDMPKLEKWSSWNENGGREGILLPCLKKLNINNCPKLTRL 3
            G   F SLE L +  M +LE+W + +          PCL++L++++CP L  +
Sbjct: 787  GQNPFPSLERLAIYSMKRLEQWDACS---------FPCLRQLHVSSCPLLAEI 830


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