BLASTX nr result

ID: Coptis23_contig00024364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024364
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-...   110   2e-22
emb|CBI27404.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-...    90   2e-16
ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
gb|ACU19904.1| unknown [Glycine max]                                   83   3e-14

>ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Vitis vinifera]
          Length = 318

 Score =  110 bits (274), Expect = 2e-22
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
 Frame = +1

Query: 55  MSKENVRKQVLEKNRSLKQKEKPGQNFISKHLKKVYPLGXXXXXXXXXXXXXXXXXXXXV 234
           MSK NVR+  LEKNRS+K++EKP Q F+S++L+K+YPL                     +
Sbjct: 1   MSKGNVRRLFLEKNRSIKEQEKPNQGFLSRNLRKIYPLSLQKSTSS-------------L 47

Query: 235 PLNGNITPGDSNTPLSSAPMSPTSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQN-SMDI 411
            L+        N+  SS     T   R+  +SL R + PPE +E  V+++NV Q  S D+
Sbjct: 48  SLSSLSLSLSQNSNDSSLKDYITPLDRQIALSL-RLIGPPERREVPVAITNVPQQPSPDV 106

Query: 412 QDGNLKRCYWITKNSDKAYVQYHDESWGV 498
            DG LKRC WITKNSDK YVQ+HDE WGV
Sbjct: 107 GDGELKRCNWITKNSDKVYVQFHDECWGV 135


>emb|CBI27404.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score =  110 bits (274), Expect = 2e-22
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
 Frame = +1

Query: 55  MSKENVRKQVLEKNRSLKQKEKPGQNFISKHLKKVYPLGXXXXXXXXXXXXXXXXXXXXV 234
           MSK NVR+  LEKNRS+K++EKP Q F+S++L+K+YPL                     +
Sbjct: 1   MSKGNVRRLFLEKNRSIKEQEKPNQGFLSRNLRKIYPLSLQKSTSS-------------L 47

Query: 235 PLNGNITPGDSNTPLSSAPMSPTSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQN-SMDI 411
            L+        N+  SS     T   R+  +SL R + PPE +E  V+++NV Q  S D+
Sbjct: 48  SLSSLSLSLSQNSNDSSLKDYITPLDRQIALSL-RLIGPPERREVPVAITNVPQQPSPDV 106

Query: 412 QDGNLKRCYWITKNSDKAYVQYHDESWGV 498
            DG LKRC WITKNSDK YVQ+HDE WGV
Sbjct: 107 GDGELKRCNWITKNSDKVYVQFHDECWGV 135


>ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Cucumis sativus] gi|449531521|ref|XP_004172734.1|
           PREDICTED: probable GMP synthase
           [glutamine-hydrolyzing]-like [Cucumis sativus]
          Length = 308

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/147 (34%), Positives = 75/147 (51%)
 Frame = +1

Query: 58  SKENVRKQVLEKNRSLKQKEKPGQNFISKHLKKVYPLGXXXXXXXXXXXXXXXXXXXXVP 237
           SK  VR+ +LE+    K+K++  QN +SKHLKK+YP+G                    + 
Sbjct: 3   SKATVRRHILERQACPKEKDRTSQNILSKHLKKIYPIG-------------LQRTTSSLS 49

Query: 238 LNGNITPGDSNTPLSSAPMSPTSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQNSMDIQD 417
           L+        N+  SS   S     +K   + IR + PP  + ++    ++ Q S ++ D
Sbjct: 50  LSSMSLSLSQNSNDSSLTDSSIQLDQKISYA-IRLITPPPERREVPLPKSIQQQSQELSD 108

Query: 418 GNLKRCYWITKNSDKAYVQYHDESWGV 498
           G L+RC WIT  SDKAYV +HDE WGV
Sbjct: 109 GELRRCNWITHTSDKAYVSFHDECWGV 135


>ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|222863953|gb|EEF01084.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
 Frame = +1

Query: 55  MSKENVRKQVLEKNRSL-KQKEKP---GQNFISKHLKKVYPLGXXXXXXXXXXXXXXXXX 222
           M K NVRKQ+LEKN  L K+KEKP    Q   SKHLK+VYP+G                 
Sbjct: 1   MYKANVRKQILEKNNILIKEKEKPISNTQGLFSKHLKRVYPIGLHRSTSSLSLS------ 54

Query: 223 XXXVPLNGNITPGDSNTPLSSAPMSPTSRGRKTPMSLIRDL--RPPEIKEKLVSVSNVGQ 396
                ++ +++   +++ L+ +   P  +     + LI  L  R   +           Q
Sbjct: 55  ----SVSLSLSQNSNDSSLTDSSAVPLEQKISLALRLISPLERREVPVARNFQPQQQQQQ 110

Query: 397 NSMDIQDGNLKRCYWITKNSDKAYVQYHDESWGV 498
            + D  DG +KRC WITKNSDK YV +HDE WGV
Sbjct: 111 QNQDSNDGEVKRCNWITKNSDKVYVAFHDECWGV 144


>gb|ACU19904.1| unknown [Glycine max]
          Length = 231

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
 Frame = +1

Query: 55  MSKENVRKQVLEKNRSLKQKEKP-GQNFISKHLKKVYPLGXXXXXXXXXXXXXXXXXXXX 231
           MSK NVR+  LEK RS+K+ +K    NF +++LKKVYP+G                    
Sbjct: 1   MSKTNVRRHALEKCRSVKETQKVLNHNFFTRNLKKVYPIGLQKSTSSLSLSS-------- 52

Query: 232 VPLNGNITPGDSNTPLSSAPMSPTSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQNSMD- 408
           + L+ + +  DS+   S  P+       K  ++L R + P E +E  ++ S   Q     
Sbjct: 53  ISLSLSQSSNDSSQADSLTPLD-----EKISLAL-RLISPRERREPTIATSKPLQQQQPP 106

Query: 409 -----IQDGNLKRCYWITKNSDKAYVQYHDESWGV 498
                 + G LKRC WITK+SDKAY+++HDE WGV
Sbjct: 107 SPPPTTEPGELKRCNWITKSSDKAYIEFHDECWGV 141


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