BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024363
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...    89   7e-16
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...    86   6e-15
ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinu...    84   2e-14
dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]          83   3e-14
ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]...    75   8e-12

>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 784

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
 Frame = -1

Query: 567  FPKGSPMAKHFSEAFLKLSEDGTLNKLDNFWFKSSSSQASQCKDCDTSTDNQSLGLDNFW 388
            F KGSP+A   S+A LKLSE+G L  L+  WF  S   +S   D D +   +SL L NFW
Sbjct: 611  FQKGSPIAADVSKAILKLSENGELKTLEEKWFAPSRECSSSATDNDIT---ESLSLQNFW 667

Query: 387  GLFLVTVLTSTIMVILYIVRPLRKLRRHSVPQIGTTLHVDTSFWNRIKTLGSYF---NIV 217
            G++++T  TSTI ++L++ R L+          G     D S W +  TL  Y      V
Sbjct: 668  GIYIITGATSTICLLLFLFRLLKNYHHQQDEDRGNATPSDKSVWGKTVTLARYIYHGETV 727

Query: 216  RPSDKDPKSGEARDIAGLVSSNGEFRT--DTSEHPQTIRVTEIEL 88
             P    P S  + D+    SS  EF +  DT E+ Q     EIE+
Sbjct: 728  IPGG-SPISAPSPDVYEWNSSRREFSSPEDTPENLQPSPPAEIEV 771


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 931

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
 Frame = -1

Query: 567  FPKGSPMAKHFSEAFLKLSEDGTLNKLDNFWFKSSSSQASQCKDCDTSTDN-QSLGLDNF 391
            F KGSP+A   S+A L LSEDG L  L+  WF    +Q+ QC    T  D  +SL L +F
Sbjct: 756  FQKGSPIAADVSKAILNLSEDGELKNLEEKWF----AQSRQCFSNATDNDKTESLSLQSF 811

Query: 390  WGLFLVTVLTSTIMVILYIVRPLRKLRRHSVPQIGTTLHVDTSFWNRIKTLGSYF---NI 220
            WG++++T  TSTI  +L++   L+   +  V   G     D S W +  TL  Y      
Sbjct: 812  WGIYIITGATSTICFLLFLFHLLKNYHKQEVEDRGNATPSDKSVWEKTVTLARYIYHGET 871

Query: 219  VRPSDKDPKSGEARDIAGLVSSNGEFRT--DTSEHPQTIRVTEIEL 88
            V P +  P    + DI    SSN E     DT E+  +    EIE+
Sbjct: 872  VTPGE-SPIPNPSPDIHEWNSSNLELSNPEDTQENLLSSSPAEIEV 916


>ref|XP_002522526.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223538217|gb|EEF39826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 843

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = -1

Query: 570 AFPKGSPMAKHFSEAFLKLSEDGTLNKLDNFWFKSSSSQASQCKDCDTSTDNQSLGLDNF 391
           AF KGSP+A   S+A LKLSEDG+L KL++ WF  SS  AS   D      N+SL L NF
Sbjct: 696 AFQKGSPIAADVSKAILKLSEDGSLKKLEDKWFTPSSQCASNAND----NRNESLSLQNF 751

Query: 390 WGLFLVTVLTSTIMVILYIVRPLRK 316
           WGL+L++  TSTI  +L+++  L+K
Sbjct: 752 WGLYLISGATSTICFLLFLIHLLKK 776


>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
 Frame = -1

Query: 570  AFPKGSPMAKHFSEAFLKLSEDGTLNKLDNFWFKSSSSQASQCKDCDTSTDNQSLGLDNF 391
            AF KGSP+A+  SEA L L++DGTLN+L+  WF  S +    C + D + + +SL L +F
Sbjct: 751  AFQKGSPLARDVSEAILTLTQDGTLNRLEEHWFALSKN----CDNVDPTGETESLTLGSF 806

Query: 390  WGLFLVTVLTSTIMVILYIVRPLRKLRRHSVPQIGTTLH--VDTSFWNR 250
            WGL+LV+  TST+ ++ Y+    RK R+ +       LH   D S W +
Sbjct: 807  WGLYLVSGATSTLCLLFYVYHLFRKSRQLTGAFRDNILHPSTDQSLWTK 855


>ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]
            gi|355492304|gb|AES73507.1| Glutamate receptor 2.8
            [Medicago truncatula]
          Length = 990

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = -1

Query: 570  AFPKGSPMAKHFSEAFLKLSEDGTLNKLDNFWFKSSSSQASQCKDCDTS-TDNQSLGLDN 394
            AFPKGSP+    S A L +++ G +  ++N WFK      S+C D +T  + N SLGL++
Sbjct: 798  AFPKGSPLVADISRAILNVTQGGKMRTIENAWFKE-----SRCLDSNTEISSNNSLGLES 852

Query: 393  FWGLFLVTVLTSTIMVILYIVRPLRKLRRHSVPQIGTTLHVDTSFWNRIKTLGSYFN 223
            FWGLFL+  + S + +++++V  L     H    I    +   S W RI+ +   F+
Sbjct: 853  FWGLFLIAGIASLLALLIFVVTFL-----HQHKHIWLNNNPSNSIWRRIEVVFRMFD 904