BLASTX nr result

ID: Coptis23_contig00024359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024359
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310962.1| predicted protein [Populus trichocarpa] gi|2...   240   3e-61
ref|XP_002274914.1| PREDICTED: uncharacterized protein LOC100255...   237   3e-60
emb|CBI29132.3| unnamed protein product [Vitis vinifera]              230   3e-58
gb|ABV89667.1| hypothetical protein at5g04910 [Brassica rapa]         223   6e-56
ref|NP_196111.2| uncharacterized protein [Arabidopsis thaliana] ...   220   4e-55

>ref|XP_002310962.1| predicted protein [Populus trichocarpa] gi|222850782|gb|EEE88329.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  240 bits (612), Expect = 3e-61
 Identities = 122/206 (59%), Positives = 153/206 (74%), Gaps = 1/206 (0%)
 Frame = -2

Query: 708 EGFKDKVKIIE-DADEMAVDDASSKSSKVESQLKRFLDIQQKRAQTYAKLKRGFTEYIVG 532
           E F+ K  + + +A E     +SSKSS     L+RFL+IQ++RAQ YAKLK+GF+EY+V 
Sbjct: 10  EDFEKKASLTDTEAMETEAAASSSKSSNTLLLLRRFLEIQERRAQAYAKLKQGFSEYMVS 69

Query: 531 GGDSAYQQLCSEITQEFSDCSKQVLEIESLFLNPDFSRSDLACLLRSVQTHEKQKLHMTV 352
           GG+ AYQQLCS+IT+EF+DCSKQV+E+ESLFLNPD  R DLA LLR +QT EKQKLH+T 
Sbjct: 70  GGELAYQQLCSKITEEFNDCSKQVIEMESLFLNPDHDRVDLAHLLRDIQTQEKQKLHLTA 129

Query: 351 TIQVLKKAGRPSERLVSHEHCKFHRPAEHECVHVHXXXXXXXXXXXXXXXXXXXXXXXAI 172
           TIQ+LKKAGRPSERLV+HE+C+F RP EHECVH+H                       AI
Sbjct: 130 TIQLLKKAGRPSERLVNHENCRFSRPMEHECVHLHEITEASGTEEAEADAEYDNALKEAI 189

Query: 171 RGVQDAVTSINEHLEEVRYELEALKA 94
           RGVQD+VT+INEHLEE++YE+ AL+A
Sbjct: 190 RGVQDSVTTINEHLEEIKYEIAALEA 215


>ref|XP_002274914.1| PREDICTED: uncharacterized protein LOC100255669 [Vitis vinifera]
           gi|147819625|emb|CAN69816.1| hypothetical protein
           VITISV_026899 [Vitis vinifera]
          Length = 203

 Score =  237 bits (604), Expect = 3e-60
 Identities = 123/206 (59%), Positives = 148/206 (71%)
 Frame = -2

Query: 708 EGFKDKVKIIEDADEMAVDDASSKSSKVESQLKRFLDIQQKRAQTYAKLKRGFTEYIVGG 529
           E F+ KVKI E  D     +  + SSK    L+RFL IQQ+RAQ YA ++RGF +Y+V G
Sbjct: 2   EDFEKKVKITEAMDI----ENGADSSKTLQLLRRFLQIQQRRAQAYANMRRGFADYMVSG 57

Query: 528 GDSAYQQLCSEITQEFSDCSKQVLEIESLFLNPDFSRSDLACLLRSVQTHEKQKLHMTVT 349
           G+SAYQQLC+EIT EF++CSKQVLE+ESLFL+PD+ R DLA LLRSVQ  EKQKLH+T T
Sbjct: 58  GESAYQQLCNEITVEFNECSKQVLEMESLFLDPDYGRDDLAHLLRSVQNQEKQKLHLTAT 117

Query: 348 IQVLKKAGRPSERLVSHEHCKFHRPAEHECVHVHXXXXXXXXXXXXXXXXXXXXXXXAIR 169
           IQ+LKKAGRPSERLVSHE CKF  P  HECVHVH                       AIR
Sbjct: 118 IQLLKKAGRPSERLVSHEKCKFKNPEGHECVHVHEITEAAGTEEAEADAEYDNALNEAIR 177

Query: 168 GVQDAVTSINEHLEEVRYELEALKAD 91
           GVQDAVT+IN+HLEE++YE+ AL+A+
Sbjct: 178 GVQDAVTTINDHLEEIKYEIAALEAE 203


>emb|CBI29132.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  230 bits (587), Expect = 3e-58
 Identities = 115/182 (63%), Positives = 137/182 (75%)
 Frame = -2

Query: 636 SSKVESQLKRFLDIQQKRAQTYAKLKRGFTEYIVGGGDSAYQQLCSEITQEFSDCSKQVL 457
           SSK    L+RFL IQQ+RAQ YA ++RGF +Y+V GG+SAYQQLC+EIT EF++CSKQVL
Sbjct: 9   SSKTLQLLRRFLQIQQRRAQAYANMRRGFADYMVSGGESAYQQLCNEITVEFNECSKQVL 68

Query: 456 EIESLFLNPDFSRSDLACLLRSVQTHEKQKLHMTVTIQVLKKAGRPSERLVSHEHCKFHR 277
           E+ESLFL+PD+ R DLA LLRSVQ  EKQKLH+T TIQ+LKKAGRPSERLVSHE CKF  
Sbjct: 69  EMESLFLDPDYGRDDLAHLLRSVQNQEKQKLHLTATIQLLKKAGRPSERLVSHEKCKFKN 128

Query: 276 PAEHECVHVHXXXXXXXXXXXXXXXXXXXXXXXAIRGVQDAVTSINEHLEEVRYELEALK 97
           P  HECVHVH                       AIRGVQDAVT+IN+HLEE++YE+ AL+
Sbjct: 129 PEGHECVHVHEITEAAGTEEAEADAEYDNALNEAIRGVQDAVTTINDHLEEIKYEIAALE 188

Query: 96  AD 91
           A+
Sbjct: 189 AE 190


>gb|ABV89667.1| hypothetical protein at5g04910 [Brassica rapa]
          Length = 196

 Score =  223 bits (567), Expect = 6e-56
 Identities = 113/196 (57%), Positives = 141/196 (71%), Gaps = 5/196 (2%)
 Frame = -2

Query: 663 MAVDDASSKSSKVESQ-----LKRFLDIQQKRAQTYAKLKRGFTEYIVGGGDSAYQQLCS 499
           M ++   S SS V S      L+R L+IQ++RAQ YAKLKRGF+EY+   G++ YQ+LCS
Sbjct: 1   MEIECGGSSSSTVGSSRTLVLLRRLLEIQERRAQAYAKLKRGFSEYVETSGEALYQKLCS 60

Query: 498 EITQEFSDCSKQVLEIESLFLNPDFSRSDLACLLRSVQTHEKQKLHMTVTIQVLKKAGRP 319
           EIT EF++CSKQV E+E+LFLNPD  RSDLA LL  +QT EKQKLH+TVTIQVLKKAGRP
Sbjct: 61  EITAEFNECSKQVREMETLFLNPDVGRSDLAQLLSDIQTQEKQKLHLTVTIQVLKKAGRP 120

Query: 318 SERLVSHEHCKFHRPAEHECVHVHXXXXXXXXXXXXXXXXXXXXXXXAIRGVQDAVTSIN 139
           SER+++HE+CKF +P +HECVH+H                        IRGVQDAVT IN
Sbjct: 121 SERMLTHENCKFKKPMQHECVHLHEITEAEGTEEAEADAEFDNALKEVIRGVQDAVTCIN 180

Query: 138 EHLEEVRYELEALKAD 91
           E+LE+VRYE+ AL+AD
Sbjct: 181 EYLEDVRYEIAALEAD 196


>ref|NP_196111.2| uncharacterized protein [Arabidopsis thaliana]
           gi|91806806|gb|ABE66130.1| hypothetical protein
           At5g04910 [Arabidopsis thaliana]
           gi|332003420|gb|AED90803.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 222

 Score =  220 bits (560), Expect = 4e-55
 Identities = 112/190 (58%), Positives = 140/190 (73%), Gaps = 4/190 (2%)
 Frame = -2

Query: 648 ASSKSSKVESQ----LKRFLDIQQKRAQTYAKLKRGFTEYIVGGGDSAYQQLCSEITQEF 481
           +S+  S V SQ    L+  L+IQQ+RAQ YA LK GF+EY+  G ++ YQ+LCSEIT EF
Sbjct: 33  SSTVGSGVASQTLVLLRSLLEIQQRRAQAYANLKSGFSEYVESGAEALYQKLCSEITTEF 92

Query: 480 SDCSKQVLEIESLFLNPDFSRSDLACLLRSVQTHEKQKLHMTVTIQVLKKAGRPSERLVS 301
           S+CSKQV E+ESLFLNP+  R+DLA LL  +QT EKQKLH+TVTIQVLKKAGRPSER+++
Sbjct: 93  SECSKQVREMESLFLNPEVGRADLAKLLSDIQTQEKQKLHLTVTIQVLKKAGRPSERMLT 152

Query: 300 HEHCKFHRPAEHECVHVHXXXXXXXXXXXXXXXXXXXXXXXAIRGVQDAVTSINEHLEEV 121
           HE+CKF +P +HECVH+H                       AIRGVQDAVTSINE+LE++
Sbjct: 153 HENCKFKKPMQHECVHLHEITEAAGTEEAEADAEFDNALKEAIRGVQDAVTSINEYLEDI 212

Query: 120 RYELEALKAD 91
           RYE+EAL+AD
Sbjct: 213 RYEIEALEAD 222


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