BLASTX nr result

ID: Coptis23_contig00024345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024345
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543966.1| PREDICTED: uncharacterized protein LOC100784...    82   3e-14
ref|XP_003545679.1| PREDICTED: wall-associated receptor kinase 3...    80   2e-13
ref|XP_002520279.1| ATP binding protein, putative [Ricinus commu...    79   3e-13
ref|XP_002284691.2| PREDICTED: wall-associated receptor kinase 3...    77   1e-12
ref|XP_003545677.1| PREDICTED: wall-associated receptor kinase 2...    77   1e-12

>ref|XP_003543966.1| PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
          Length = 1481

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/61 (63%), Positives = 48/61 (78%)
 Frame = -2

Query: 440 ENRLFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPW 261
           E+RLFD+++ GIVNE   ++I  VA LA +CL LNGEERPSMKEVA ELEG+R  E+ PW
Sbjct: 634 EDRLFDIVQIGIVNEENKKEIMEVAILAAKCLRLNGEERPSMKEVAMELEGIRIMEKHPW 693

Query: 260 I 258
           I
Sbjct: 694 I 694



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
 Frame = -2

Query: 440  ENRLFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPW 261
            E+RL DV++ GI+NE   ++I  VA LA +CL LNGEERPSM+EVA EL+ +R  E+ PW
Sbjct: 1371 EDRLSDVVQDGIMNEENKKEIMEVAILAAKCLRLNGEERPSMREVAIELDAIRQKEKHPW 1430

Query: 260  I---QQSNGKNMSLASDEIDLYAIPSGCYTDSASGLYSLENDMIQSMN 126
            I   Q        L      +Y     C     +G  S+ + ++ S++
Sbjct: 1431 INRDQNMEETQFLLHDASSSIYTHGDSCSHQCTAGYDSIRDHVVISLD 1478


>ref|XP_003545679.1| PREDICTED: wall-associated receptor kinase 3-like [Glycine max]
          Length = 691

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = -2

Query: 440 ENRLFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPW 261
           E+RLFDV + GIVNE   ++I  VA LA +CL LNGEERPSMKEVA EL+ +R  E+ PW
Sbjct: 581 EDRLFDVFQVGIVNEENKKEIVEVAILAAKCLRLNGEERPSMKEVAMELDAIRQKEKHPW 640

Query: 260 IQQSNGKNMSLASDEIDLYAIPSGCYT--DSASGLYSLENDMIQ 135
           I      + ++   +  L+   S  Y   DS+S  Y+   D I+
Sbjct: 641 I----SGDQNIEETQFLLHDASSSIYADGDSSSHQYTTGYDSIR 680


>ref|XP_002520279.1| ATP binding protein, putative [Ricinus communis]
           gi|223540498|gb|EEF42065.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1433

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = -2

Query: 440 ENRLFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPW 261
           E+RL +V+E  I+NEG +EQI  V+ LAKRCL + GEERP+MKEVA ELEGLR   + PW
Sbjct: 642 EDRLVNVLEDCILNEGNIEQIKEVSSLAKRCLRVKGEERPTMKEVAMELEGLRLMVKHPW 701

Query: 260 IQQSNGKN 237
           +   +  +
Sbjct: 702 VNNESNSS 709



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 51/72 (70%)
 Frame = -2

Query: 431  LFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPWIQQ 252
            LF ++++ IV++   EQI  VA++A+ CL L GEERP+MKEVA ELEGLR  E  PW+Q 
Sbjct: 1338 LFGILDSRIVDQRNKEQIEEVAKVAEGCLTLKGEERPTMKEVAVELEGLRKMEVHPWVQV 1397

Query: 251  SNGKNMSLASDE 216
            + G+   L S++
Sbjct: 1398 NQGETEYLLSEQ 1409


>ref|XP_002284691.2| PREDICTED: wall-associated receptor kinase 3-like [Vitis vinifera]
          Length = 820

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/69 (50%), Positives = 48/69 (69%)
 Frame = -2

Query: 440 ENRLFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPW 261
           ++RLF V++  IVNE  +EQ+   A+LAKRCL L G+ERP+MKEV  ELEGLR  +  PW
Sbjct: 713 DDRLFQVLDEHIVNEENIEQLKEAAKLAKRCLRLKGDERPTMKEVVMELEGLRIMKTHPW 772

Query: 260 IQQSNGKNM 234
           I     +++
Sbjct: 773 IDSQENEHL 781


>ref|XP_003545677.1| PREDICTED: wall-associated receptor kinase 2-like [Glycine max]
          Length = 717

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = -2

Query: 440 ENRLFDVIEAGIVNEGKVEQIHAVAQLAKRCLNLNGEERPSMKEVAAELEGLRGFERRPW 261
           E+RL DV++ G++NE   ++I  V  LA  CL LNGEERPSMKEVA ELE +R  E+ PW
Sbjct: 608 EDRLIDVLQFGLLNEENKKEIMEVTVLAANCLRLNGEERPSMKEVAMELEAIRQMEKHPW 667

Query: 260 IQQSNGKNMSLASDEIDLYAIPSGCY--TDSASGLYS 156
           I     +  +L   +  L+  PS  Y   DS+S  Y+
Sbjct: 668 I----NREKNLEETQYLLHDAPSKIYEHRDSSSLQYN 700


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