BLASTX nr result

ID: Coptis23_contig00024342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024342
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   221   8e-56
tpg|DAA50400.1| TPA: putative MATE efflux family protein [Zea mays]   203   2e-50
ref|NP_001050703.1| Os03g0626700 [Oryza sativa Japonica Group] g...   201   8e-50
ref|XP_002464213.1| hypothetical protein SORBIDRAFT_01g014210 [S...   197   9e-49
ref|XP_003562258.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   194   1e-47

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  221 bits (562), Expect = 8e-56
 Identities = 103/146 (70%), Positives = 126/146 (86%)
 Frame = +3

Query: 117 MAHKSWEESKMMWNIAGAAILVSVTQFSIEFVTIAFVGHLGNLELAAVSVVQNVLECFVY 296
           M  +SW+ESK MW IA  A++ +VTQFSI FVT A+VGHLG +ELAAVS+VQNV+E FVY
Sbjct: 29  MVKRSWDESKRMWEIAAPAMITAVTQFSIGFVTSAYVGHLGEVELAAVSIVQNVIEGFVY 88

Query: 297 GVMLGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPILKILRQ 476
           GVMLGMGSALETLCGQAVGAGQ+NMLG+YMQ+SWIIT + AL L P Y+FASP+L++L Q
Sbjct: 89  GVMLGMGSALETLCGQAVGAGQLNMLGVYMQKSWIITGVAALFLAPFYIFASPLLQLLHQ 148

Query: 477 SKSISDLAGKYSLWTLPQLYAYSLNF 554
            K IS+LAGKYS+W LPQL+A+++NF
Sbjct: 149 DKDISELAGKYSIWVLPQLFAFAINF 174


>tpg|DAA50400.1| TPA: putative MATE efflux family protein [Zea mays]
          Length = 495

 Score =  203 bits (516), Expect = 2e-50
 Identities = 95/149 (63%), Positives = 123/149 (82%)
 Frame = +3

Query: 108 EGSMAHKSWEESKMMWNIAGAAILVSVTQFSIEFVTIAFVGHLGNLELAAVSVVQNVLEC 287
           + ++  KSW+ESK++W+IA  AIL +V QFSI FVT+ FVGH+G++ELAAV+VV+NV+E 
Sbjct: 13  KAAVVSKSWQESKLLWHIAFPAILTAVFQFSIGFVTVGFVGHIGSVELAAVTVVENVIEG 72

Query: 288 FVYGVMLGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPILKI 467
           F YGV+LGMGSALETLCGQAVGAGQV MLG+Y+QRSWII   TA++LTPTY+F +PIL+ 
Sbjct: 73  FAYGVLLGMGSALETLCGQAVGAGQVGMLGVYIQRSWIICGATAVLLTPTYLFTAPILRA 132

Query: 468 LRQSKSISDLAGKYSLWTLPQLYAYSLNF 554
           LRQ   ++ +AG Y  W LPQL+AY+ NF
Sbjct: 133 LRQPADVARVAGAYCRWVLPQLFAYAANF 161


>ref|NP_001050703.1| Os03g0626700 [Oryza sativa Japonica Group]
           gi|16924114|gb|AAL31693.1|AC092390_14 putative multidrug
           efflux protein [Oryza sativa Japonica Group]
           gi|37718791|gb|AAR01662.1| putative MATE efflux family
           protein [Oryza sativa Japonica Group]
           gi|108709922|gb|ABF97717.1| MATE efflux family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113549174|dbj|BAF12617.1| Os03g0626700 [Oryza sativa
           Japonica Group]
          Length = 477

 Score =  201 bits (510), Expect = 8e-50
 Identities = 97/148 (65%), Positives = 121/148 (81%)
 Frame = +3

Query: 111 GSMAHKSWEESKMMWNIAGAAILVSVTQFSIEFVTIAFVGHLGNLELAAVSVVQNVLECF 290
           G +  KSW+ESK++W+IA  AIL +V QFSI FVT+ FVGH+G +ELAAV+VV+NV+E F
Sbjct: 2   GKLVSKSWQESKLLWHIAFPAILTAVFQFSIGFVTVGFVGHIGQVELAAVTVVENVIEGF 61

Query: 291 VYGVMLGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPILKIL 470
            YGV+LGMGSALETLCGQAVGAGQV+MLG+Y+QRSWII   TA+ILTPTYVF + IL  L
Sbjct: 62  AYGVLLGMGSALETLCGQAVGAGQVSMLGVYIQRSWIICGATAVILTPTYVFTAGILIGL 121

Query: 471 RQSKSISDLAGKYSLWTLPQLYAYSLNF 554
           RQ   I+ +AG Y+ W +PQL+AY+ NF
Sbjct: 122 RQPTDIAAVAGTYTRWVIPQLFAYAANF 149


>ref|XP_002464213.1| hypothetical protein SORBIDRAFT_01g014210 [Sorghum bicolor]
           gi|241918067|gb|EER91211.1| hypothetical protein
           SORBIDRAFT_01g014210 [Sorghum bicolor]
          Length = 493

 Score =  197 bits (501), Expect = 9e-49
 Identities = 93/143 (65%), Positives = 121/143 (84%)
 Frame = +3

Query: 126 KSWEESKMMWNIAGAAILVSVTQFSIEFVTIAFVGHLGNLELAAVSVVQNVLECFVYGVM 305
           KS +ESK++W+IA  AIL +V QFSI FVT+AFVGH+G++ELAAV+VV+NV+E F YGV+
Sbjct: 17  KSLQESKLLWHIAFPAILTAVFQFSIGFVTVAFVGHIGSVELAAVTVVENVIEGFAYGVL 76

Query: 306 LGMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPILKILRQSKS 485
           LGMGSALETLCGQAVGAGQV+MLG+Y+QRSW+I   TA++LTPTY+F +PIL+ LRQ   
Sbjct: 77  LGMGSALETLCGQAVGAGQVSMLGVYIQRSWLICGATAVVLTPTYLFTAPILRALRQPGD 136

Query: 486 ISDLAGKYSLWTLPQLYAYSLNF 554
           ++ +AG Y+ W  PQL+AY+ NF
Sbjct: 137 VARVAGTYARWVAPQLFAYAANF 159


>ref|XP_003562258.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Brachypodium
           distachyon]
          Length = 492

 Score =  194 bits (492), Expect = 1e-47
 Identities = 93/142 (65%), Positives = 114/142 (80%)
 Frame = +3

Query: 129 SWEESKMMWNIAGAAILVSVTQFSIEFVTIAFVGHLGNLELAAVSVVQNVLECFVYGVML 308
           SWEESK++W+IA  AIL +V QFSI FVT+ F GH+G  ELAAV+VV+NV+E F YGV+L
Sbjct: 32  SWEESKLLWHIAFPAILTAVFQFSIGFVTVGFAGHIGEAELAAVTVVENVIEGFSYGVLL 91

Query: 309 GMGSALETLCGQAVGAGQVNMLGIYMQRSWIITCITALILTPTYVFASPILKILRQSKSI 488
           GMGSALETLCGQAVGAGQ +MLG+Y+QRSWII   TAL L+PTY+F + IL+ L Q   I
Sbjct: 92  GMGSALETLCGQAVGAGQADMLGVYIQRSWIICGATALFLSPTYIFTARILRALHQPADI 151

Query: 489 SDLAGKYSLWTLPQLYAYSLNF 554
           S +AG Y+ W LPQL+AY+ NF
Sbjct: 152 SAVAGSYTRWVLPQLFAYAANF 173


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