BLASTX nr result

ID: Coptis23_contig00024338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00024338
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33185.3| unnamed protein product [Vitis vinifera]               41   2e-07
ref|NP_001170087.1| uncharacterized protein LOC100384005 [Zea ma...    42   2e-07
gb|AFW82728.1| hypothetical protein ZEAMMB73_493658 [Zea mays]         42   2e-07
gb|EAY82742.1| hypothetical protein OsI_37952 [Oryza sativa Indi...    40   2e-07
gb|EEC83069.1| hypothetical protein OsI_28190 [Oryza sativa Indi...    41   2e-07

>emb|CBI33185.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +1

Query: 97  LNPIIIDFDMAVQFEEDQRYGNIM-LRDNWVHVSPSCLDGANMIGGTISLKCDIYGYGVV 273
           +NP I DF MA  F  DQ  GN   +   + ++SP        + G  S+K D+Y +G++
Sbjct: 403 MNPKISDFGMARIFGGDQIEGNTSRVVGTYGYMSPEYA-----MEGQFSIKSDVYSFGIL 457

Query: 274 LMEILSARDRYNY 312
           L+EI++ R    Y
Sbjct: 458 LLEIITGRKNSTY 470



 Score = 38.9 bits (89), Expect(2) = 2e-07
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +2

Query: 11  TKITRLDWASRFRIIRGIAEGIAYLHNRASTRL 109
           TK + LDW  RF II GIA GI YLH  +  R+
Sbjct: 355 TKRSLLDWKKRFEIILGIARGILYLHQDSRLRI 387


>ref|NP_001170087.1| uncharacterized protein LOC100384005 [Zea mays]
           gi|224033363|gb|ACN35757.1| unknown [Zea mays]
           gi|413950080|gb|AFW82729.1| hypothetical protein
           ZEAMMB73_493658 [Zea mays]
          Length = 402

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 22/69 (31%), Positives = 40/69 (57%)
 Frame = +1

Query: 103 PIIIDFDMAVQFEEDQRYGNIMLRDNWVHVSPSCLDGANMIGGTISLKCDIYGYGVVLME 282
           P I DF +A  F +DQ + +  L   + +++P  +     + G ++ K DIY YGV+++E
Sbjct: 214 PKIADFGLARNFMDDQSHLSTGLAGTFGYMAPEYI-----VHGQLTEKADIYSYGVLVLE 268

Query: 283 ILSARDRYN 309
           I++ R  +N
Sbjct: 269 IVTGRKSHN 277



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 14  KITRLDWASRFRIIRGIAEGIAYLHNRASTRL 109
           K   LDW  RF I+ G AEG++YLH+ +  R+
Sbjct: 165 KKNALDWERRFEIVLGTAEGLSYLHSASEVRI 196


>gb|AFW82728.1| hypothetical protein ZEAMMB73_493658 [Zea mays]
          Length = 385

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 22/69 (31%), Positives = 40/69 (57%)
 Frame = +1

Query: 103 PIIIDFDMAVQFEEDQRYGNIMLRDNWVHVSPSCLDGANMIGGTISLKCDIYGYGVVLME 282
           P I DF +A  F +DQ + +  L   + +++P  +     + G ++ K DIY YGV+++E
Sbjct: 197 PKIADFGLARNFMDDQSHLSTGLAGTFGYMAPEYI-----VHGQLTEKADIYSYGVLVLE 251

Query: 283 ILSARDRYN 309
           I++ R  +N
Sbjct: 252 IVTGRKSHN 260



 Score = 37.7 bits (86), Expect(2) = 2e-07
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 14  KITRLDWASRFRIIRGIAEGIAYLHNRASTRL 109
           K   LDW  RF I+ G AEG++YLH+ +  R+
Sbjct: 148 KKNALDWERRFEIVLGTAEGLSYLHSASEVRI 179


>gb|EAY82742.1| hypothetical protein OsI_37952 [Oryza sativa Indica Group]
          Length = 248

 Score = 40.4 bits (93), Expect(2) = 2e-07
 Identities = 16/25 (64%), Positives = 21/25 (84%)
 Frame = +2

Query: 23  RLDWASRFRIIRGIAEGIAYLHNRA 97
           +LDW+SRFRII+GI +GI YLH  +
Sbjct: 47  QLDWSSRFRIIQGITQGIIYLHTHS 71



 Score = 39.7 bits (91), Expect(2) = 2e-07
 Identities = 22/71 (30%), Positives = 39/71 (54%)
 Frame = +1

Query: 79  LFAQQSLNPIIIDFDMAVQFEEDQRYGNIMLRDNWVHVSPSCLDGANMIGGTISLKCDIY 258
           +     +NP I DF +A + ++D+   N  +R    ++ P  +     + G IS+K D+Y
Sbjct: 86  ILLDSDMNPKIGDFGLAKELKDDEI--NARVRGTLGYMPPEYI-----VEGVISVKNDVY 138

Query: 259 GYGVVLMEILS 291
           G+GV L+E +S
Sbjct: 139 GFGVTLLETIS 149


>gb|EEC83069.1| hypothetical protein OsI_28190 [Oryza sativa Indica Group]
          Length = 589

 Score = 40.8 bits (94), Expect(2) = 2e-07
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 26  LDWASRFRIIRGIAEGIAYLHNRASTRL 109
           LDW++RF I  GIA G+AYLH  +STR+
Sbjct: 313 LDWSTRFDICVGIARGLAYLHEESSTRI 340



 Score = 38.9 bits (89), Expect(2) = 2e-07
 Identities = 23/76 (30%), Positives = 42/76 (55%)
 Frame = +1

Query: 97  LNPIIIDFDMAVQFEEDQRYGNIMLRDNWVHVSPSCLDGANMIGGTISLKCDIYGYGVVL 276
           LNP I DF +A  +E++  + +  +     +++P        + G ++ K D++ YGVV 
Sbjct: 356 LNPKISDFGLARHYEDNMTHLSTGVAGTLGYLAPEYA-----MMGHLTEKADVFAYGVVA 410

Query: 277 MEILSARDRYNYDSSI 324
           MEI++ R   N+D S+
Sbjct: 411 MEIIAGRP--NFDESL 424


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